RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SPATA2Q9UM82 520 aa11.19□□□□□ -0.62
HMGN3-201ENST00000275036 VSIG4Q9Y279 399 aa11.19□□□□□ -0.62
HMGN3-201ENST00000275036 OR2W1Q9Y3N9 320 aa11.19□□□□□ -0.62
HMGN3-201ENST00000275036 KMT2CQ8NEZ4 4911 aaKnown RBP11.18□□□□□ -0.62
HMGN3-201ENST00000275036 CTXN2P0C2S0 81 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 LGALS7P47929 136 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 FXYD3Q14802 87 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 TIMM50Q3ZCQ8 353 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 AKIRIN2Q53H80 203 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 ZNF645Q8N7E2 425 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 ARPC1AQ92747 370 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 AUNIPQ9H7T9 357 aa11.18□□□□□ -0.62
HMGN3-201ENST00000275036 SHOXO15266 292 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 TUSC2O75896 110 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 RPL30P62888 115 aaKnown RBP11.17□□□□□ -0.62
HMGN3-201ENST00000275036 TAGLNQ01995 201 aaKnown RBP11.17□□□□□ -0.62
HMGN3-201ENST00000275036 TMEM267Q0VDI3 215 aaPredicted RBP11.17□□□□□ -0.62
HMGN3-201ENST00000275036 ACTBL2Q562R1 376 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 C11orf87Q6NUJ2 197 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 TCTEX1D1Q8N7M0 179 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 OR5M8Q8NGP6 311 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 OR1N2Q8NGR9 330 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 GRPEL2Q8TAA5 225 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 GPR61Q9BZJ8 451 aa11.17□□□□□ -0.62
HMGN3-201ENST00000275036 A0A0A6YYH2 397 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 A6NJ64 397 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 CRYZL1O95825 349 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 FCER2P06734 321 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 RRASP10301 218 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 ZNF616Q08AN1 781 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 EIF4EBP1Q13541 118 aaPredicted RBP11.16□□□□□ -0.62
HMGN3-201ENST00000275036 RTL8BQ17RB0 113 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 HOGA1Q86XE5 327 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 DPF1Q92782 380 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 ADTRPQ96IZ2 230 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 MS4A10Q96PG2 267 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 VCX3AQ9NNX9 186 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 SCOCQ9UIL1 159 aa11.16□□□□□ -0.62
HMGN3-201ENST00000275036 RBMX2Q9Y388 322 aaKnown RBP11.16□□□□□ -0.62
HMGN3-201ENST00000275036 MEIS3P1A6NDR6 274 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 SEC14L6B5MCN3 397 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 TMEM127O75204 238 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.62
HMGN3-201ENST00000275036 CBX3Q13185 183 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 PYHIN1Q6K0P9 492 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 IDO2Q6ZQW0 420 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 CROCCP3Q8IVE0 287 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 SNAPC3Q92966 411 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 GPHA2Q96T91 129 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 FUNDC2Q9BWH2 189 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 DIABLOQ9NR28 239 aa11.15□□□□□ -0.62
HMGN3-201ENST00000275036 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 A0A087WW49 117 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 XRCC3O43542 346 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 FCGR3BO75015 233 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 CNIH1O95406 144 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 OR8U8P0C7N1 319 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 SMIM18P0DKX4 95 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 AADACP22760 399 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 SLURP1P55000 103 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 BRWD1-AS2P59051 145 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 TPPP2P59282 170 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 UBE2KP61086 200 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 NCS1P62166 190 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 DGCR2P98153 550 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 UBE2NLQ5JXB2 153 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 C9orf66Q5T8R8 295 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 KCTD9Q7L273 389 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 SAMD12Q8N8I0 201 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 DCUN1D4Q92564 292 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 SLC25A46Q96AG3 418 aa11.14□□□□□ -0.63
HMGN3-201ENST00000275036 HUWE1Q7Z6Z7 4374 aaKnown RBP11.14□□□□□ -0.63
HMGN3-201ENST00000275036 SLC22A5O76082 557 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 SAA1P0DJI8 122 aaPredicted RBP11.13□□□□□ -0.63
HMGN3-201ENST00000275036 APELAP0DMC3 54 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 FCGR2CP31995 323 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 ARPC4P59998 168 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 VBP1P61758 197 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 DEFA5Q01523 94 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 PRSS8Q16651 343 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 VMA21Q3ZAQ7 101 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 TEX45Q8NA69 505 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 POC5Q8NA72 575 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 OR13F1Q8NGS4 319 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 OSR1Q8TAX0 266 aaPredicted RBP11.13□□□□□ -0.63
HMGN3-201ENST00000275036 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
HMGN3-201ENST00000275036 RHOVQ96L33 236 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 PRR25Q96S07 402 aa11.13□□□□□ -0.63
HMGN3-201ENST00000275036 RYR3Q15413 4870 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 LINC01619G3V211 115 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 PPYP01298 95 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 TRGV3P03979 118 aa11.12□□□□□ -0.63
HMGN3-201ENST00000275036 TAS2R20P59543 309 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms