RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 LBHQ53QV2 105 aaPredicted RBP23■■□□□ 1.27
CBX4-201ENST00000269397 RFESDQ8TAC1 157 aa23■■□□□ 1.27
CBX4-201ENST00000269397 SDSLQ96GA7 329 aa23■■□□□ 1.27
CBX4-201ENST00000269397 PATZ1Q9HBE1 687 aaKnown RBP23■■□□□ 1.27
CBX4-201ENST00000269397 TYMSP04818 313 aa23■■□□□ 1.27
CBX4-201ENST00000269397 CD33P20138 364 aa23■■□□□ 1.27
CBX4-201ENST00000269397 DUSP3P51452 185 aaPredicted RBP23■■□□□ 1.27
CBX4-201ENST00000269397 PLPPR2Q96GM1 343 aa23■■□□□ 1.27
CBX4-201ENST00000269397 LINC00473A8K010 186 aa22.99■■□□□ 1.27
CBX4-201ENST00000269397 VENTXO95231 258 aa22.99■■□□□ 1.27
CBX4-201ENST00000269397 GCH1P30793 250 aa22.99■■□□□ 1.27
CBX4-201ENST00000269397 LRP11Q86VZ4 500 aa22.99■■□□□ 1.27
CBX4-201ENST00000269397 Q8IYB0 196 aa22.99■■□□□ 1.27
CBX4-201ENST00000269397 BEND2Q8NDZ0 799 aa22.99■■□□□ 1.27
CBX4-201ENST00000269397 MLNRO43193 412 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 COL8A2P25067 703 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 PPP1CBP62140 327 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 IQCJQ1A5X6 159 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 KNTC1P50748 2209 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 RPL15P61313 204 aaKnown RBP22.98■■□□□ 1.27
CBX4-201ENST00000269397 CATR1Q13166 79 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 Q6ZR03 302 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 BCL2L2Q92843 193 aaPredicted RBP22.98■■□□□ 1.27
CBX4-201ENST00000269397 SNHG12Q9BXW3 62 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 FKBP11Q9NYL4 201 aa22.98■■□□□ 1.27
CBX4-201ENST00000269397 SOX15O60248 233 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 CD82P27701 267 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 SSTR5P35346 364 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 GABRA2P47869 451 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 SPCS3P61009 180 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 EIF4EBP1Q13541 118 aaPredicted RBP22.97■■□□□ 1.27
CBX4-201ENST00000269397 LTC4SQ16873 150 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 FIP1L1Q6UN15 594 aaKnown RBP22.97■■□□□ 1.27
CBX4-201ENST00000269397 Q8N7P7 452 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 NINJ1Q92982 152 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 TMEM30CPA0ZSE6 113 aa22.97■■□□□ 1.27
CBX4-201ENST00000269397 RBFOX2O43251 390 aaKnown RBP eCLIP22.97■■□□□ 1.276e-7■■■■□ 23.2
CBX4-201ENST00000269397 QTRT1Q9BXR0 403 aaKnown RBP22.97■■□□□ 1.27
CBX4-201ENST00000269397 NUTF2P61970 127 aaKnown RBP22.96■■□□□ 1.27
CBX4-201ENST00000269397 SGMS2Q8NHU3 365 aa22.96■■□□□ 1.27
CBX4-201ENST00000269397 CLDN14O95500 239 aa22.96■■□□□ 1.27
CBX4-201ENST00000269397 TBC1D28Q2M2D7 210 aa22.96■■□□□ 1.27
CBX4-201ENST00000269397 KMT2EQ8IZD2 1858 aa22.96■■□□□ 1.27
CBX4-201ENST00000269397 GRIFINA4D1Z8 144 aa22.95■■□□□ 1.27
CBX4-201ENST00000269397 C15orf62A8K5M9 175 aa22.95■■□□□ 1.27
CBX4-201ENST00000269397 C17orf112F2Z3M2 114 aa22.95■■□□□ 1.27
CBX4-201ENST00000269397 SMPD2O60906 423 aa22.95■■□□□ 1.27
CBX4-201ENST00000269397 CCKARP32238 428 aa22.95■■□□□ 1.27
CBX4-201ENST00000269397 SLC25A40Q8TBP6 338 aa22.95■■□□□ 1.27
CBX4-201ENST00000269397 MRPL37Q9BZE1 423 aaKnown RBP22.95■■□□□ 1.27
CBX4-201ENST00000269397 TRBV20OR9-2A0A075B6H5 130 aa22.95■■□□□ 1.26
CBX4-201ENST00000269397 G0S2P27469 103 aa22.95■■□□□ 1.26
CBX4-201ENST00000269397 NEU1Q99519 415 aa22.95■■□□□ 1.26
CBX4-201ENST00000269397 POLR3KQ9Y2Y1 108 aaPredicted RBP22.95■■□□□ 1.26
CBX4-201ENST00000269397 ZDBF2Q9HCK1 2354 aa22.95■■□□□ 1.26
CBX4-201ENST00000269397 VWC2Q2TAL6 325 aa22.95■■□□□ 1.26
CBX4-201ENST00000269397 A0A1W2PPV4 95 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 MARCH11A6NNE9 402 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 LCN2P80188 198 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 PSG11Q9UQ72 335 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 CD1BP29016 333 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 LPAL2Q16609 132 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 TMEM144Q7Z5S9 345 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 ZBTB34Q8NCN2 500 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 COQ2Q96H96 371 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 CIB3Q96Q77 187 aaPredicted RBP22.94■■□□□ 1.26
CBX4-201ENST00000269397 DCTN5Q9BTE1 182 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 DEFB127Q9H1M4 99 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 OBP2BQ9NPH6 170 aa22.94■■□□□ 1.26
CBX4-201ENST00000269397 RAB29O14966 203 aa22.93■■□□□ 1.26
CBX4-201ENST00000269397 FBXW9Q5XUX1 488 aa22.93■■□□□ 1.26
CBX4-201ENST00000269397 FAM234AQ9H0X4 552 aa22.93■■□□□ 1.26
CBX4-201ENST00000269397 METRNQ9UJH8 293 aa22.93■■□□□ 1.26
CBX4-201ENST00000269397 PXMP4Q9Y6I8 212 aa22.93■■□□□ 1.26
CBX4-201ENST00000269397 THBS3P49746 956 aa22.93■■□□□ 1.26
CBX4-201ENST00000269397 PSG7Q13046 419 aa22.93■■□□□ 1.26
CBX4-201ENST00000269397 PDE6DO43924 150 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 OR9G9P0C7N8 305 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 CASP6P55212 293 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 MS4A10Q96PG2 267 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 OOEPA6NGQ2 149 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 ADMP35318 185 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 ZNF766Q5HY98 468 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 NANOS1Q8WY41 292 aaKnown RBP22.92■■□□□ 1.26
CBX4-201ENST00000269397 SFRP2Q96HF1 295 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 IMMP2LQ96T52 175 aa22.92■■□□□ 1.26
CBX4-201ENST00000269397 ZNF705FA8MVS1 300 aaPredicted RBP22.91■■□□□ 1.26
CBX4-201ENST00000269397 ZNF705DP0CH99 300 aaPredicted RBP22.91■■□□□ 1.26
CBX4-201ENST00000269397 ZNF705BP0CI00 300 aaPredicted RBP22.91■■□□□ 1.26
CBX4-201ENST00000269397 ARL14EPLP0DKL9 152 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 MPV17P39210 176 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 VKORC1L1Q8N0U8 176 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 IGHV3-13P01766 116 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 IGHV3-7P01780 117 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 ELOVL5Q9NYP7 299 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 NAGKQ9UJ70 344 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 WDR83OSQ9Y284 106 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 HCFC1P51610 2035 aa22.91■■□□□ 1.26
CBX4-201ENST00000269397 OR13A1Q8NGR1 328 aa22.9■■□□□ 1.26
CBX4-201ENST00000269397 TNRC18O15417 2968 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms