RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 CCL3L1P16619 93 aa19.04■□□□□ 0.64
RAB40B-201ENST00000269347 NDUFB7P17568 137 aa19.04■□□□□ 0.64
RAB40B-201ENST00000269347 OR2B8PP59922 312 aa19.04■□□□□ 0.64
RAB40B-201ENST00000269347 ZNF525Q8N782 197 aa19.04■□□□□ 0.64
RAB40B-201ENST00000269347 TMEM106BQ9NUM4 274 aa19.04■□□□□ 0.64
RAB40B-201ENST00000269347 TRGV10A0A0A0MS01 117 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 NPBWR1P48145 328 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 FAM213BQ8TBF2 198 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 R3HDM4Q96D70 268 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 RSG1Q9BU20 258 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 QTRT1Q9BXR0 403 aaKnown RBP19.03■□□□□ 0.64
RAB40B-201ENST00000269347 PRH1P02810 166 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 FAM122CQ6P4D5 195 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 DIRC2Q96SL1 478 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 PKD1L2Q7Z442 2459 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 CACNA1AO00555 2505 aa19.03■□□□□ 0.64
RAB40B-201ENST00000269347 RAB29O14966 203 aa19.02■□□□□ 0.64
RAB40B-201ENST00000269347 SNCAP37840 140 aa19.02■□□□□ 0.64
RAB40B-201ENST00000269347 RAB5CP51148 216 aa19.02■□□□□ 0.64
RAB40B-201ENST00000269347 DHRS7BQ6IAN0 325 aaPredicted RBP19.02■□□□□ 0.64
RAB40B-201ENST00000269347 STX12Q86Y82 276 aa19.02■□□□□ 0.64
RAB40B-201ENST00000269347 CBLN2Q8IUK8 224 aa19.02■□□□□ 0.64
RAB40B-201ENST00000269347 VSIRQ9H7M9 311 aa19.02■□□□□ 0.64
RAB40B-201ENST00000269347 SLC25A10Q9UBX3 287 aaPredicted RBP19.02■□□□□ 0.64
RAB40B-201ENST00000269347 PPIAL4EA0A075B759 164 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 PPIAL4DF5H284 164 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 PPIAL4FP0DN26 164 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 CHRNB4P30926 498 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 FBXL19-AS1Q494R0 122 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 TMEM14EPQ6UXP3 125 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 H2BFWTQ7Z2G1 175 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 IDI2-AS1Q9NZ38 188 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 STRAPQ9Y3F4 350 aaKnown RBP19.02■□□□□ 0.63
RAB40B-201ENST00000269347 PPIAL4AQ9Y536 164 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 TNCP24821 2201 aa19.02■□□□□ 0.63
RAB40B-201ENST00000269347 PMS2P5A8MQ11 134 aa19.01■□□□□ 0.63
RAB40B-201ENST00000269347 GPR37O15354 613 aa19.01■□□□□ 0.63
RAB40B-201ENST00000269347 LOXP28300 417 aaPredicted RBP19.01■□□□□ 0.63
RAB40B-201ENST00000269347 SPSB3Q6PJ21 355 aa19.01■□□□□ 0.63
RAB40B-201ENST00000269347 COMMD1Q8N668 190 aa19.01■□□□□ 0.63
RAB40B-201ENST00000269347 ZNF383Q8NA42 475 aa19.01■□□□□ 0.63
RAB40B-201ENST00000269347 CORO2AQ92828 525 aa19.01■□□□□ 0.63
RAB40B-201ENST00000269347 LINC00574Q9H8X3 128 aa19.01■□□□□ 0.63
RAB40B-201ENST00000269347 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.01■□□□□ 0.63
RAB40B-201ENST00000269347 FBXO7Q9Y3I1 522 aa19.01■□□□□ 0.63
RAB40B-201ENST00000269347 CD3EP07766 207 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 CASP6P55212 293 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 HNF4GQ14541 408 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 THNSL2Q86YJ6 484 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 LYG1Q8N1E2 194 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 DYNLRB1Q9NP97 96 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 CISD1Q9NZ45 108 aaKnown RBP19■□□□□ 0.63
RAB40B-201ENST00000269347 SVEP1Q4LDE5 3571 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 FAM90A26D6RGX4 464 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 CTRB1P17538 263 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 APOBEC3AP31941 199 aaPredicted RBP19■□□□□ 0.63
RAB40B-201ENST00000269347 SP5Q6BEB4 398 aaPredicted RBP19■□□□□ 0.63
RAB40B-201ENST00000269347 CTRB2Q6GPI1 263 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 NGBQ9NPG2 151 aa19■□□□□ 0.63
RAB40B-201ENST00000269347 RALYQ9UKM9 306 aaKnown RBP19■□□□□ 0.63
RAB40B-201ENST00000269347 TRAV38-1A0A0B4J264 116 aa18.99■□□□□ 0.63
RAB40B-201ENST00000269347 EIF3GO75821 320 aaKnown RBP eCLIP18.99■□□□□ 0.63
RAB40B-201ENST00000269347 TMEM200BQ69YZ2 307 aa18.99■□□□□ 0.63
RAB40B-201ENST00000269347 OR8G2PQ6IF36 304 aa18.99■□□□□ 0.63
RAB40B-201ENST00000269347 ZCCHC14Q8WYQ9 949 aaKnown RBP18.99■□□□□ 0.63
RAB40B-201ENST00000269347 ASH1LQ9NR48 2969 aaKnown RBP18.99■□□□□ 0.63
RAB40B-201ENST00000269347 PIGBOS1A0A0B4J2F0 54 aa18.99■□□□□ 0.63
RAB40B-201ENST00000269347 ZNF729A6NN14 1252 aaPredicted RBP18.99■□□□□ 0.63
RAB40B-201ENST00000269347 EGLN1Q9GZT9 426 aa18.99■□□□□ 0.63
RAB40B-201ENST00000269347 NDRG3Q9UGV2 375 aa18.99■□□□□ 0.63
RAB40B-201ENST00000269347 RPUSD1Q9UJJ7 312 aaKnown RBP18.99■□□□□ 0.63
RAB40B-201ENST00000269347 TAS2R30P59541 319 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 SSX8Q7RTT4 187 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 TCTEX1D1Q8N7M0 179 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 HPRT1P00492 218 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 H2AFB1P0C5Y9 115 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 MYOD1P15172 320 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 RPL31P62899 125 aaKnown RBP18.98■□□□□ 0.63
RAB40B-201ENST00000269347 PEA15Q15121 130 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 GUK1Q16774 197 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 SSX7Q7RTT5 188 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 DTD1Q8TEA8 209 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 PRORYQ9H606 182 aa18.98■□□□□ 0.63
RAB40B-201ENST00000269347 PPIHO43447 177 aaKnown RBP18.97■□□□□ 0.63
RAB40B-201ENST00000269347 COL8A2P25067 703 aa18.97■□□□□ 0.63
RAB40B-201ENST00000269347 PPT1P50897 306 aa18.97■□□□□ 0.63
RAB40B-201ENST00000269347 EFNB3Q15768 340 aa18.97■□□□□ 0.63
RAB40B-201ENST00000269347 RARRES2Q99969 163 aa18.97■□□□□ 0.63
RAB40B-201ENST00000269347 KPTNQ9Y664 436 aa18.97■□□□□ 0.63
RAB40B-201ENST00000269347 LINC00312Q9Y6C7 94 aa18.97■□□□□ 0.63
RAB40B-201ENST00000269347 NKX6-3A6NJ46 265 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 H7C2Y5 167 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 DLL1O00548 723 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 ITGB1BP1O14713 200 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 DLX1P56177 255 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 MRPS11P82912 194 aaKnown RBP18.96■□□□□ 0.63
RAB40B-201ENST00000269347 TFF3Q07654 80 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 RBMXL2O75526 392 aaKnown RBP18.96■□□□□ 0.63
RAB40B-201ENST00000269347 RELBQ01201 579 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 HFEQ30201 348 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms