RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 RAB7AP51149 207 aa16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 ZNF266Q14584 549 aa16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 PRAMEF5Q5TYX0 476 aa16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 TMEM200BQ69YZ2 307 aa16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 TCTEX1D1Q8N7M0 179 aa16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 RNASE11Q8TAA1 199 aaKnown RBP16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 NEU4Q8WWR8 484 aaPredicted RBP16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 GPR146Q96CH1 333 aa16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 ABHD14AQ9BUJ0 271 aa16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 SPTBN1Q01082 2364 aaKnown RBP16.94■□□□□ 0.3
LYSMD2-201ENST00000267838 A0A1B0GW64 132 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 COLCA2A8K830 154 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 C9JQL5 133 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 MMP23AO75900 390 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 PRH1P02810 166 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 SLC25A6P12236 298 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 NKX2-1P43699 371 aaPredicted RBP16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 AKR1D1P51857 326 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 OR10A7Q8NGE5 316 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 ZNF714Q96N38 554 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 SMDT1Q9H4I9 107 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 TUBA4BQ9H853 241 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 RPUSD1Q9UJJ7 312 aaKnown RBP16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 LAMP3Q9UQV4 416 aa16.93■□□□□ 0.3
LYSMD2-201ENST00000267838 A0A1B0GU03 582 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 LINC00473A8K010 186 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 C17orf98A8MV24 154 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 RAMP3O60896 148 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 PROP1O75360 226 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 IGKV1-5P01602 117 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 EPHA1P21709 976 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 RNF212Q495C1 297 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 CT45A1Q5HYN5 189 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 OR2B11Q5JQS5 317 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 ZNF439Q8NDP4 499 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 CT45A3Q8NHU0 189 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 BSCL2Q96G97 398 aaPredicted RBP16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 SLC25A31Q9H0C2 315 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 ZNF98A6NK75 572 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 PITX3O75364 302 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 CCL3L1P16619 93 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 BRWD1-AS2P59051 145 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 MRPS11P82912 194 aaKnown RBP16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 EWSR1Q01844 656 aaKnown RBP eCLIP16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 OR2C3Q8N628 320 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 UBTD1Q9HAC8 227 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 GAB2Q9UQC2 676 aa16.92■□□□□ 0.3
LYSMD2-201ENST00000267838 A0A1W2PPE3 182 aa16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 A6NNC1 897 aa16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 LY6HO94772 140 aa16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 MMP9P14780 707 aa16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 DUTP33316 252 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 RPL35P42766 123 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 ZNF816Q0VGE8 651 aaPredicted RBP16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 CXorf66Q5JRM2 361 aaPredicted RBP16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 EIF5A2Q9GZV4 153 aaKnown RBP16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 C11orf1Q9H5F2 150 aa16.91■□□□□ 0.3
LYSMD2-201ENST00000267838 ARID1AO14497 2285 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 UMAD1C9J7I0 102 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 M0R1X1 148 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 DAOP14920 347 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 LINC00205P59089 165 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 ID3Q02535 119 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 RPL39P5Q59GN2 51 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 CLEC9AQ6UXN8 241 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 HEPN1Q6WQI6 88 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 RPS10P5Q9NQ39 176 aa16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 YLPM1P49750 1951 aaKnown RBP16.9■□□□□ 0.3
LYSMD2-201ENST00000267838 C1orf196B1AJZ1 125 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 MT-ND4LP03901 98 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 GNG10P50151 68 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 POLR2GP62487 172 aaKnown RBP eCLIP16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 RHEBQ15382 184 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 IZUMO4Q1ZYL8 232 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 NCR3LG1Q68D85 454 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 Q6ZRM9 215 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 SCRT1Q9BWW7 348 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 CACNG5Q9UF02 275 aa16.89■□□□□ 0.3
LYSMD2-201ENST00000267838 S1PR2O95136 353 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 ERVFRD-1P60508 538 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 VAMP2P63027 116 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 NHLH2Q02577 135 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 AWAT1Q58HT5 328 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 ZNF843Q8N446 348 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 HSD17B11Q8NBQ5 300 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 SLC35B3Q9H1N7 401 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 COA4Q9NYJ1 87 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 MMP24Q9Y5R2 645 aa16.89■□□□□ 0.29
LYSMD2-201ENST00000267838 SAA2-SAA4A0A096LPE2 208 aa16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 BTBD17A6NE02 478 aa16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 RAB29O14966 203 aa16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 SAA2P0DJI9 122 aaPredicted RBP16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 BAXQ07812 192 aa16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 SLC25A48Q6ZT89 311 aaKnown RBP16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 ODF3L1Q8IXM7 274 aa16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 CD300LFQ8TDQ1 290 aa16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 RAB1CQ92928 201 aa16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 TIMD4Q96H15 378 aa16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 MAGT1Q9H0U3 335 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms