RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TINAGQ9UJW2 476 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 TAF1LQ8IZX4 1826 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 PIGYQ3MUY2 71 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 VSTM2LQ96N03 204 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 NYNRINQ9P2P1 1898 aaKnown RBP10.52□□□□□ -0.73
SRRM4-201ENST00000267260 RRHO14718 337 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 C9orf172C9J069 976 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 KLK2P20151 261 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 SPSB4Q96A44 273 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 MS4A4AQ96JQ5 239 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 TNFRSF12AQ9NP84 129 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 PLA2G3Q9NZ20 509 aa10.52□□□□□ -0.73
SRRM4-201ENST00000267260 LIPT2A6NK58 231 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 CDIPTO14735 213 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 SHISA5Q8N114 240 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 MRPL32Q9BYC8 188 aaKnown RBP10.51□□□□□ -0.73
SRRM4-201ENST00000267260 EML6Q6ZMW3 1958 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 C7orf66A4D0T2 115 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 METTL12A8MUP2 240 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 ARL14EPLP0DKL9 152 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 OR5AN1Q8NGI8 311 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 FAM216AQ8WUB2 273 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 MEGF9Q9H1U4 602 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 PRKNO60260 465 aaPredicted RBP10.51□□□□□ -0.73
SRRM4-201ENST00000267260 CNTFRP26992 372 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 NXPH1P58417 271 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 TMEM30BQ3MIR4 351 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 LPAR2Q9HBW0 351 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 KCNS1Q96KK3 526 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 TMEM131Q92545 1883 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 SRSF6Q13247 344 aaKnown RBP10.51□□□□□ -0.73
SRRM4-201ENST00000267260 CITED1Q99966 193 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 CACNA1HO95180 2353 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 APELAP0DMC3 54 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 HOXA5P20719 270 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 OR2H1Q9GZK4 316 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
SRRM4-201ENST00000267260 GSN-AS1Q9NRJ2 163 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 OR52M1Q8NGK5 317 aa10.51□□□□□ -0.73
SRRM4-201ENST00000267260 MBD1Q9UIS9 605 aaPredicted RBP10.51□□□□□ -0.73
SRRM4-201ENST00000267260 MPTX1A8MV57 137 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 LINC00869P0C866 280 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 RPL8P62917 257 aaKnown RBP10.5□□□□□ -0.73
SRRM4-201ENST00000267260 FOXQ1Q9C009 403 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 ASPDHA6ND91 283 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 ASCL4Q6XD76 172 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 HMGCLL1Q8TB92 370 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 COX11Q9Y6N1 276 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 PAX2Q02962 417 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 CLEC2AQ6UVW9 174 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 APOBEC4Q8WW27 367 aaKnown RBP10.5□□□□□ -0.73
SRRM4-201ENST00000267260 ATP5IP56385 69 aaPredicted RBP10.5□□□□□ -0.73
SRRM4-201ENST00000267260 IGKV3D-15A0A087WSY6 115 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 IGKV3-15P01624 115 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 GCSAMQ8N6F7 178 aa10.5□□□□□ -0.73
SRRM4-201ENST00000267260 TRBV20OR9-2A0A075B6H5 130 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 IGHV5-51A0A0C4DH38 117 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 RIPPLY3P57055 190 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 SPINK14Q6IE38 97 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 C14orf144Q96I85 54 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 NKX2-8O15522 239 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 COL10A1Q03692 680 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 KIR3DL3Q8N743 410 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 MARS2Q96GW9 593 aaKnown RBP10.49□□□□□ -0.73
SRRM4-201ENST00000267260 IGKV3D-11A0A0A0MRZ8 115 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 EML2O95834 649 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 IGKV3-11P04433 115 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 SRSF12Q8WXF0 261 aaKnown RBP10.49□□□□□ -0.73
SRRM4-201ENST00000267260 PRDM14Q9GZV8 571 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 SH3BGRL3Q9H299 93 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 MIXL1Q9H2W2 232 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 SLC6A13Q9NSD5 602 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 TBL2Q9Y4P3 447 aaKnown RBP10.49□□□□□ -0.73
SRRM4-201ENST00000267260 PAPPAQ13219 1627 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 GRIFINA4D1Z8 144 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 NMBP08949 121 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 RIPPLY2Q5TAB7 128 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 SLC25A2Q9BXI2 301 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 MPZL1O95297 269 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 RPL27AP46776 148 aaKnown RBP10.49□□□□□ -0.73
SRRM4-201ENST00000267260 FAM106AQ4KMX7 169 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 SF3B6Q9Y3B4 125 aaKnown RBP10.49□□□□□ -0.73
SRRM4-201ENST00000267260 CXCL2P19875 107 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 TP53I13Q8NBR0 393 aaPredicted RBP10.49□□□□□ -0.73
SRRM4-201ENST00000267260 SERGEFQ9UGK8 458 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 CD1AP06126 327 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 PNLIPP16233 465 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 FOXC1Q12948 553 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 THSD4Q6ZMP0 1018 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 OR51G1Q8NGK1 321 aa10.49□□□□□ -0.73
SRRM4-201ENST00000267260 MEX3AA1L020 520 aaKnown RBP10.48□□□□□ -0.73
SRRM4-201ENST00000267260 PGPEP1LA6NFU8 196 aa10.48□□□□□ -0.73
SRRM4-201ENST00000267260 GGTLC2Q14390 218 aa10.48□□□□□ -0.73
SRRM4-201ENST00000267260 GUSBP11Q6P575 273 aa10.48□□□□□ -0.73
SRRM4-201ENST00000267260 TNRC6AQ8NDV7 1962 aaKnown RBP10.48□□□□□ -0.73
SRRM4-201ENST00000267260 PTP4A3O75365 173 aa10.48□□□□□ -0.73
SRRM4-201ENST00000267260 LHFPL4Q7Z7J7 247 aa10.48□□□□□ -0.73
SRRM4-201ENST00000267260 ATG4DQ86TL0 474 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms