RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CALYQ9NYX4 217 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 ZDHHC8Q9ULC8 765 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 TGIF1Q15583 401 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 SLC25A47Q6Q0C1 308 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 ZNF818PQ6ZRF7 136 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 PCM1Q15154 2024 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 EPOPA6NHQ4 379 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 TNFRSF9Q07011 255 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 FAM74A4Q5TZK3 123 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 CYB5R2Q6BCY4 276 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 TDRD15B5MCY1 1934 aaKnown RBP15.44■□□□□ 0.06
COL5A3-201ENST00000264828 EGR1P18146 543 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 PLAURQ03405 335 aa15.44■□□□□ 0.06
COL5A3-201ENST00000264828 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
COL5A3-201ENST00000264828 IGLV1-36A0A0B4J1U3 117 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 ABHD12Q8N2K0 398 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 DNAJC4Q9NNZ3 241 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 LHFPL6Q9Y693 200 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 OR4D5Q8NGN0 318 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 FAM206AQ9NX38 181 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 hCG_38984A0A1B0GV85 526 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 MC5RP33032 325 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 ZNF506Q5JVG8 444 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 PEAR1Q5VY43 1037 aaPredicted RBP15.43■□□□□ 0.06
COL5A3-201ENST00000264828 MESP2Q0VG99 397 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 APCDD1LQ8NCL9 501 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 SFRP2Q96HF1 295 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 GPR82Q96P67 336 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 HLA-DRB1P01911 266 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 MEIG1Q5JSS6 88 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 MOB4Q9Y3A3 225 aa15.43■□□□□ 0.06
COL5A3-201ENST00000264828 ARF6P62330 175 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 POLR2AP24928 1970 aaKnown RBP15.42■□□□□ 0.06
COL5A3-201ENST00000264828 FAM181BA6NEQ2 426 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 PIN1P1O15428 100 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 GCM2O75603 506 aaPredicted RBP15.42■□□□□ 0.06
COL5A3-201ENST00000264828 PPP1R17O96001 155 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 ISG15P05161 165 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 SELENOTP62341 195 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 FAM214BQ7L5A3 538 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 TRBV5-7A0A0A0MS05 114 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 MARCH11A6NNE9 402 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 GDF9O60383 454 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 RECKO95980 971 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 FAM131CQ96AQ9 280 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 LY6EQ16553 131 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 LINC00518Q8N0U6 118 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 PSG9Q00887 426 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 ST6GALNAC3Q8NDV1 305 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 OR10AG1Q8NH19 301 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 HIST1H2BAQ96A08 127 aa15.42■□□□□ 0.06
COL5A3-201ENST00000264828 ZFC3H1O60293 1989 aaKnown RBP15.41■□□□□ 0.06
COL5A3-201ENST00000264828 A0A1W2PS18 150 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 C8orf88P0DMB2 117 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 CDX1P47902 265 aaPredicted RBP15.41■□□□□ 0.06
COL5A3-201ENST00000264828 DDB2Q92466 427 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 LOC101059948A0A1B0GTJ6 334 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 ZNF56Q15929 161 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 NUP214P35658 2090 aaPredicted RBP15.41■□□□□ 0.06
COL5A3-201ENST00000264828 NPBWR2P48146 333 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 SPSB4Q96A44 273 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 GGACTQ9BVM4 153 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 MMD2Q8IY49 270 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 MFAP4P55083 255 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 LEMD1Q68G75 181 aa15.41■□□□□ 0.06
COL5A3-201ENST00000264828 WNT9BO14905 357 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 TSPAN13O95857 204 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 GLIPR1P48060 266 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 RPS11P62280 158 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL5A3-201ENST00000264828 RELQ04864 619 aaPredicted RBP15.4■□□□□ 0.06
COL5A3-201ENST00000264828 TMEM187Q14656 261 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 GOLT1AQ6ZVE7 132 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 IGKV3-20P01619 116 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 DANCRP0C864 163 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 SRXN1Q9BYN0 137 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 ODAMA1E959 279 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 GPX1P07203 203 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 CHODLQ9H9P2 273 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 IGHV3-35A0A0C4DH35 117 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 MOSP00540 346 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 CBLN1P23435 193 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 DIRC2Q96SL1 478 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 C4orf51C9J302 202 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 IGHV3-23P01764 117 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 NHLRC3Q5JS37 347 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 C1orf100Q5SVJ3 147 aa15.4■□□□□ 0.06
COL5A3-201ENST00000264828 CTAG1AP78358 180 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 RSPO4Q2I0M5 234 aaPredicted RBP15.39■□□□□ 0.05
COL5A3-201ENST00000264828 TXNDC17Q9BRA2 123 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 G6PC2Q9NQR9 355 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 TMEM160Q9NX00 188 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 PILRAQ9UKJ1 303 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 MIA3Q5JRA6 1907 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 THY1P04216 161 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 HSPE1P61604 102 aaKnown RBP15.39■□□□□ 0.05
COL5A3-201ENST00000264828 STPG3Q8N7X2 389 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 WNT10AQ9GZT5 417 aa15.39■□□□□ 0.05
COL5A3-201ENST00000264828 IGHV3OR16-10A0A075B7F0 116 aa15.38■□□□□ 0.05
COL5A3-201ENST00000264828 RRHO14718 337 aa15.38■□□□□ 0.05
COL5A3-201ENST00000264828 EIF4EBP2Q13542 120 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms