RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 GATA3P23771 443 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 CYCSP99999 105 aaKnown RBP18.35■□□□□ 0.53
UFD1-201ENST00000263202 TMEM249Q2WGJ8 235 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 LSM10Q969L4 123 aaKnown RBP18.35■□□□□ 0.53
UFD1-201ENST00000263202 RPEQ96AT9 228 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 RBMXL1Q96E39 390 aaKnown RBP18.35■□□□□ 0.53
UFD1-201ENST00000263202 AUP1Q9Y679 476 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 KRASP01116 189 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 G6PCP35575 357 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 CEACAM3P40198 252 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 AKR1C2P52895 323 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 TAGLNQ01995 201 aaKnown RBP18.35■□□□□ 0.53
UFD1-201ENST00000263202 IL15RAQ13261 267 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 GPR146Q96CH1 333 aa18.35■□□□□ 0.53
UFD1-201ENST00000263202 RANBP3Q9H6Z4 567 aaPredicted RBP18.35■□□□□ 0.53
UFD1-201ENST00000263202 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.34■□□□□ 0.531e-7■■■□□ 17.3
UFD1-201ENST00000263202 IGHV1-3A0A0C4DH29 117 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 CENPVL3A0A0U1RRI6 287 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 TXNL1O43396 289 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 CRYZL1O95825 349 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 APOA2P02652 100 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 C1QBP02746 253 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 RTL8BQ17RB0 113 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 ZFP69Q49AA0 526 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 ZBTB8BQ8NAP8 495 aaPredicted RBP18.34■□□□□ 0.53
UFD1-201ENST00000263202 C7orf69Q9H7B7 122 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 COMMD9Q9P000 198 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 GSKIPQ9P0R6 139 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 ITPR2Q14571 2701 aa18.34■□□□□ 0.53
UFD1-201ENST00000263202 MAP1AP78559 2803 aaPredicted RBP18.34■□□□□ 0.53
UFD1-201ENST00000263202 ATG12O94817 140 aa18.33■□□□□ 0.53
UFD1-201ENST00000263202 IGKV1-16P04430 117 aa18.33■□□□□ 0.53
UFD1-201ENST00000263202 RRASP10301 218 aa18.33■□□□□ 0.53
UFD1-201ENST00000263202 MINOS1Q5TGZ0 78 aa18.33■□□□□ 0.53
UFD1-201ENST00000263202 DHRS7BQ6IAN0 325 aaPredicted RBP18.33■□□□□ 0.53
UFD1-201ENST00000263202 RNASE11Q8TAA1 199 aaKnown RBP18.33■□□□□ 0.53
UFD1-201ENST00000263202 PPP1R1CQ8WVI7 109 aa18.33■□□□□ 0.53
UFD1-201ENST00000263202 R3HDM4Q96D70 268 aa18.33■□□□□ 0.53
UFD1-201ENST00000263202 RRNAD1Q96FB5 475 aaKnown RBP18.33■□□□□ 0.53
UFD1-201ENST00000263202 MMP24Q9Y5R2 645 aa18.33■□□□□ 0.53
UFD1-201ENST00000263202 MINOS1-NBL1R4GNA1 71 aa18.33■□□□□ 0.53
UFD1-201ENST00000263202 P0C879 139 aa18.33■□□□□ 0.52
UFD1-201ENST00000263202 LGALS4P56470 323 aa18.33■□□□□ 0.52
UFD1-201ENST00000263202 IZUMO4Q1ZYL8 232 aa18.33■□□□□ 0.52
UFD1-201ENST00000263202 SPIN2AQ99865 258 aa18.33■□□□□ 0.52
UFD1-201ENST00000263202 SPIN2BQ9BPZ2 258 aa18.33■□□□□ 0.52
UFD1-201ENST00000263202 TBL2Q9Y4P3 447 aaKnown RBP18.33■□□□□ 0.52
UFD1-201ENST00000263202 CSMD1Q96PZ7 3565 aa18.32■□□□□ 0.52
UFD1-201ENST00000263202 A0A1W2PPI3 338 aa18.32■□□□□ 0.52
UFD1-201ENST00000263202 MARCH11A6NNE9 402 aa18.32■□□□□ 0.52
UFD1-201ENST00000263202 TGFAP01135 160 aa18.32■□□□□ 0.52
UFD1-201ENST00000263202 EPHA1P21709 976 aa18.32■□□□□ 0.52
UFD1-201ENST00000263202 MC5RP33032 325 aa18.32■□□□□ 0.52
UFD1-201ENST00000263202 Q6ZRM9 215 aa18.32■□□□□ 0.52
UFD1-201ENST00000263202 HILPDAQ9Y5L2 63 aa18.32■□□□□ 0.52
UFD1-201ENST00000263202 H7C2Y5 167 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 SLC25A6P12236 298 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 NQO2P16083 231 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 GZMKP49863 264 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 LRRC37A5PQ49AS3 106 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 MOB3BQ86TA1 216 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 PDPNQ86YL7 162 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 FAM219AQ8IW50 185 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 OR4D5Q8NGN0 318 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 WASHC3Q9Y3C0 194 aa18.31■□□□□ 0.52
UFD1-201ENST00000263202 TRAV14DV4A0A0A6YYC5 116 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 A0A1B0GU03 582 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 NOXA1Q86UR1 476 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 OR11H4Q8NGC9 324 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 C17orf50Q8WW18 174 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 IGHV3-72A0A0B4J1Y9 119 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 NPFFO15130 113 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 SAA4P35542 130 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 MIDNQ504T8 468 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 TMEM177Q53S58 311 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 THOC7Q6I9Y2 204 aaKnown RBP18.3■□□□□ 0.52
UFD1-201ENST00000263202 VKORC1L1Q8N0U8 176 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 OR8H3Q8N146 312 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 DYNAPQ8N1N2 210 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 CIARTQ8N365 385 aaPredicted RBP18.3■□□□□ 0.52
UFD1-201ENST00000263202 AJUBAQ96IF1 538 aa18.3■□□□□ 0.52
UFD1-201ENST00000263202 TRAV40A0A0B4J280 105 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 OOSP1A8MZH6 123 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 J3QLI3 93 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 AVPP01185 164 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 PSMB6P28072 239 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 EIF2B2P49770 351 aaKnown RBP18.29■□□□□ 0.52
UFD1-201ENST00000263202 RAB13P51153 203 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 FGL1Q08830 312 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 RAB32Q13637 225 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 SMCO1Q147U7 214 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 SSX2Q16385 188 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 H2BFWTQ7Z2G1 175 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 PIP4P2Q8N4L2 257 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 DMBX1Q8NFW5 382 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 OSR1Q8TAX0 266 aaPredicted RBP18.29■□□□□ 0.52
UFD1-201ENST00000263202 FLYWCH2Q96CP2 140 aaKnown RBP18.29■□□□□ 0.52
UFD1-201ENST00000263202 CACNG5Q9UF02 275 aa18.29■□□□□ 0.52
UFD1-201ENST00000263202 IGHV1-69DA0A0B4J2H0 117 aa18.28■□□□□ 0.52
UFD1-201ENST00000263202 PITX3O75364 302 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms