RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 UBALD2Q8IYN6 164 aa10.35□□□□□ -0.75
SMG6-201ENST00000263073 IGHV3OR16-13A0A075B7E8 117 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 IGHV3-74A0A0B4J1X5 117 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 A0A1W2PQF6 199 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 MOSP00540 346 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 CD1AP06126 327 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 ADRA2AP08913 450 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 TFF3Q07654 80 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 PMCHL1Q16048 86 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 TMEM136Q6ZRR5 245 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 PTPRFP10586 1907 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 F5P12259 2224 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 LOXL3P58215 753 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 ZNF831Q5JPB2 1677 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 KLF4O43474 513 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 EIF4EBP2Q13542 120 aaPredicted RBP10.34□□□□□ -0.75
SMG6-201ENST00000263073 CENPWQ5EE01 88 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 C16orf92Q96LL3 132 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 TMEM210A6NLX4 147 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 SLC25A17O43808 307 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 ZP4Q12836 540 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 ITLN1Q8WWA0 313 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 TMEM45BQ96B21 275 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 SELENOKQ9Y6D0 94 aa10.34□□□□□ -0.75
SMG6-201ENST00000263073 IGHV3-66A0A0C4DH42 116 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 MARCH11A6NNE9 402 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 NPIPB9F8W1W9 429 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 C1orf210Q8IVY1 113 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 ZNF714Q96N38 554 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 SRXN1Q9BYN0 137 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 TMEM160Q9NX00 188 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 TAF1LQ8IZX4 1826 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 IGHV4-34P06331 123 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 C1orf100Q5SVJ3 147 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 FAM181AQ8N9Y4 354 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 STXBP6Q8NFX7 210 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 CDX2Q99626 313 aaPredicted RBP10.33□□□□□ -0.76
SMG6-201ENST00000263073 TRAV8-6A0A0B4J262 113 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 PROB1E7EW31 1015 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 SLC25A47Q6Q0C1 308 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 PILRAQ9UKJ1 303 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 COL11A2P13942 1736 aaPredicted RBP10.33□□□□□ -0.76
SMG6-201ENST00000263073 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
SMG6-201ENST00000263073 LINC01590Q5TEZ4 76 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 ASPHD2Q6ICH7 369 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 UNQ9370/PRO34162Q6UXP9 181 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 TBL2Q9Y4P3 447 aaKnown RBP10.33□□□□□ -0.76
SMG6-201ENST00000263073 TRAV14DV4A0A0A6YYC5 116 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 DPRXA6NFQ7 191 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 A6NNC1 897 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 KLRB1Q12918 225 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 OR4D5Q8NGN0 318 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 PMCHL2Q9BQD1 86 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 CRISPLD2Q9H0B8 497 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 RPRMQ9NS64 109 aa10.33□□□□□ -0.76
SMG6-201ENST00000263073 ZNF638Q14966 1978 aaKnown RBP10.32□□□□□ -0.76
SMG6-201ENST00000263073 SCO2A0A1W2PP80 73 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 MT-ND6P03923 174 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 RPL27AP46776 148 aaKnown RBP10.32□□□□□ -0.76
SMG6-201ENST00000263073 RPS11P62280 158 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMG6-201ENST00000263073 TTC32Q5I0X7 151 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 SFTA2Q6UW10 78 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 HERPUD1Q15011 391 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 RPL39P5Q59GN2 51 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 GOLT1AQ6ZVE7 132 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 FAM131CQ96AQ9 280 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 KNTC1P50748 2209 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 PPIAL4EA0A075B759 164 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 PQLC2LA1A4F0 135 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 PPIAL4DF5H284 164 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 PPIAL4FP0DN26 164 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 ATP5G3P48201 142 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 STPG3Q8N7X2 389 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 SLC25A28Q96A46 364 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 COL25A1Q9BXS0 654 aaPredicted RBP10.32□□□□□ -0.76
SMG6-201ENST00000263073 RAXQ9Y2V3 346 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 PPIAL4AQ9Y536 164 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 IGKV3-20P01619 116 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 KCNMB1Q16558 191 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 TMEM78Q5T7P6 136 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 GMPPAQ96IJ6 420 aaPredicted RBP10.32□□□□□ -0.76
SMG6-201ENST00000263073 Q96M66 194 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 LNP1A1A4G5 178 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 DLL1O00548 723 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 RBFOX2O43251 390 aaKnown RBP eCLIP10.32□□□□□ -0.762e-6■■■■□ 23.3
SMG6-201ENST00000263073 MIEN1Q9BRT3 115 aa10.32□□□□□ -0.76
SMG6-201ENST00000263073 IGKV1D-43A0A0B4J1Z2 117 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 WNT9BO14905 357 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 CGAP01215 116 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 MPV17P39210 176 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 EGR4Q05215 589 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 NR2C2APQ86WQ0 139 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 OR4A5Q8NH83 315 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 ZNF501Q96CX3 271 aaPredicted RBP10.31□□□□□ -0.76
SMG6-201ENST00000263073 MYO16Q9Y6X6 1858 aa10.31□□□□□ -0.76
SMG6-201ENST00000263073 TYMSP04818 313 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms