RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 DEFA5Q01523 94 aa11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 IDNKQ5T6J7 187 aa11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 H1FOOQ8IZA3 346 aaPredicted RBP11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 OR5M8Q8NGP6 311 aa11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 UBE2E2Q96LR5 201 aa11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 PRR25Q96S07 402 aa11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 MCRIP2Q9BUT9 160 aaKnown RBP11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 WDR12Q9GZL7 423 aaKnown RBP11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 VSIG4Q9Y279 399 aa11.29□□□□□ -0.6
RBFOX2-201ENST00000262829 SRRM4A7MD48 611 aaKnown RBP11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 SSX5O60225 188 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 TMEM127O75204 238 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 PTHLHP12272 177 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 SSBP2P81877 361 aaPredicted RBP11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 FHL3Q13643 280 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 FXYD3Q14802 87 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 ACTBL2Q562R1 376 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 HACD4Q5VWC8 232 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 TPRA1Q86W33 373 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 OR5T1Q8NG75 326 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 TSNAXQ99598 290 aaKnown RBP11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 TOLLIPQ9H0E2 274 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 SCOCQ9UIL1 159 aa11.28□□□□□ -0.6
RBFOX2-201ENST00000262829 LINC00473A8K010 186 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 CNIH1O95406 144 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 ECI1P42126 302 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 SLURP1P55000 103 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 ZNF260Q3ZCT1 412 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 OR2B11Q5JQS5 317 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 C11orf87Q6NUJ2 197 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 IDO2Q6ZQW0 420 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 DCUN1D4Q92564 292 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 SLC25A38Q96DW6 304 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 HARBI1Q96MB7 349 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 GPHA2Q96T91 129 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 ZNF355PQ9NSJ1 428 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 RHBDL2Q9NX52 303 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 DNAH9Q9NYC9 4486 aa11.27□□□□□ -0.61
RBFOX2-201ENST00000262829 TRAV18A0A075B6X5 111 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 IGKV1D-13A0A0B4J2D9 117 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 SHOXO15266 292 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 IGKV1-13P0DP09 117 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 GNG2P59768 71 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 LSM3P62310 102 aaKnown RBP11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 DGCR2P98153 550 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 ZNF616Q08AN1 781 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 RNF5Q99942 180 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 GPR61Q9BZJ8 451 aa11.26□□□□□ -0.61
RBFOX2-201ENST00000262829 IGHV4OR15-8A0A075B7B6 117 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 A0A087WW49 117 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 CRYZL1O95825 349 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 DTYMKP23919 212 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 TPPP2P59282 170 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 TMEM267Q0VDI3 215 aaPredicted RBP11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 KCTD21Q4G0X4 260 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 GVQW1Q8N7I0 195 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 DLX4Q92988 240 aaPredicted RBP11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 MEIS3P1A6NDR6 274 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 TUSC2O75896 110 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 TRGV3P03979 118 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 CRYGBP07316 175 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 MRGPRG-AS1Q2M3A8 158 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 AKIRIN2Q53H80 203 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 Q6ZS49 121 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 DDB2Q92466 427 aa11.25□□□□□ -0.61
RBFOX2-201ENST00000262829 TNCP24821 2201 aa11.24□□□□□ -0.61
RBFOX2-201ENST00000262829 SPDEFO95238 335 aa11.24□□□□□ -0.61
RBFOX2-201ENST00000262829 OR8U8P0C7N1 319 aa11.24□□□□□ -0.61
RBFOX2-201ENST00000262829 RPL30P62888 115 aaKnown RBP11.24□□□□□ -0.61
RBFOX2-201ENST00000262829 RUNX1Q01196 453 aa11.24□□□□□ -0.61
RBFOX2-201ENST00000262829 RTL8BQ17RB0 113 aa11.24□□□□□ -0.61
RBFOX2-201ENST00000262829 VKORC1L1Q8N0U8 176 aa11.24□□□□□ -0.61
RBFOX2-201ENST00000262829 ANKRD34BA5PLL1 514 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 FCGR3BO75015 233 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 IGLV2-14P01704 120 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 LGALS1P09382 135 aaKnown RBP11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 CBX3Q13185 183 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 TMEM177Q53S58 311 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 ANXA10Q9UJ72 324 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 SPATA2Q9UM82 520 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 OR2W1Q9Y3N9 320 aa11.23□□□□□ -0.61
RBFOX2-201ENST00000262829 MSGN1A6NI15 193 aa11.22□□□□□ -0.61
RBFOX2-201ENST00000262829 LINC01619G3V211 115 aa11.22□□□□□ -0.61
RBFOX2-201ENST00000262829 OVOL1O14753 267 aa11.22□□□□□ -0.61
RBFOX2-201ENST00000262829 DIRAS3O95661 229 aa11.22□□□□□ -0.61
RBFOX2-201ENST00000262829 LY86O95711 162 aa11.22□□□□□ -0.61
RBFOX2-201ENST00000262829 RPS19P39019 145 aaKnown RBP11.22□□□□□ -0.61
RBFOX2-201ENST00000262829 LGALS7P47929 136 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms