RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 GCSAMLQ5JQS6 135 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 OR10A7Q8NGE5 316 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 MBD3L1Q8WWY6 194 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 FAM234AQ9H0X4 552 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 B4GALT7Q9UBV7 327 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 C17orf98A8MV24 154 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 J3QT63 122 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 TGOLN2O43493 480 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 SS18L1O75177 396 aaPredicted RBP8.44□□□□□ -1.06
LIG3-201ENST00000262327 LYZL6O75951 148 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 DPPA3Q6W0C5 159 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 ZNF497Q6ZNH5 498 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 MRGPRGQ86SM5 289 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 TMEM204Q9BSN7 226 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 DCTN5Q9BTE1 182 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 GAL3ST2Q9H3Q3 398 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 LIN7CQ9NUP9 197 aaKnown RBP8.44□□□□□ -1.06
LIG3-201ENST00000262327 MPC1Q9Y5U8 109 aa8.44□□□□□ -1.06
LIG3-201ENST00000262327 OR5B21A6NL26 309 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 C1QTNF9BB2RNN3 333 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 SIAH2O43255 324 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 GFRA3O60609 400 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 MEF2BQ02080 365 aaPredicted RBP8.43□□□□□ -1.06
LIG3-201ENST00000262327 FBXW9Q5XUX1 488 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 OR51G1Q8NGK1 321 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 MRGPRDQ8TDS7 321 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 LSM10Q969L4 123 aaKnown RBP8.43□□□□□ -1.06
LIG3-201ENST00000262327 PARLQ9H300 379 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 ODAMA1E959 279 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 PGPEP1LA6NFU8 196 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.43□□□□□ -1.06
LIG3-201ENST00000262327 PAGE4O60829 102 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 CHRNA7P36544 502 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 MEOX1P50221 254 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
LIG3-201ENST00000262327 TMEM241Q24JQ0 296 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 BSXQ3C1V8 233 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 FFAR4Q5NUL3 377 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 VHLLQ6RSH7 139 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 ZNF66Q6ZN08 573 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 OR10G4Q8NGN3 311 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 OR10G9Q8NGN4 311 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 OR10G7Q8NGN6 311 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 TNRC6AQ8NDV7 1962 aaKnown RBP8.43□□□□□ -1.06
LIG3-201ENST00000262327 MUC6Q6W4X9 2439 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 CEP250Q9BV73 2442 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 B4DEV8 164 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 DLL1O00548 723 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 DVL1O14640 695 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 WISP2O76076 250 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 GALR1P47211 349 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 RND2P52198 227 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 FAM3BP58499 235 aaPredicted RBP8.43□□□□□ -1.06
LIG3-201ENST00000262327 PNRC1Q12796 327 aaPredicted RBP8.43□□□□□ -1.06
LIG3-201ENST00000262327 NRN1LQ496H8 165 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 SLC25A40Q8TBP6 338 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 SDSLQ96GA7 329 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 METRNQ9UJH8 293 aa8.43□□□□□ -1.06
LIG3-201ENST00000262327 EP300Q09472 2414 aaPredicted RBP8.42□□□□□ -1.06
LIG3-201ENST00000262327 A0A1B0GUS0 222 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 LRP5LA4QPB2 252 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 C12orf77C9JDV5 145 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 H7BYZ3 331 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 AGFG2O95081 481 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 OPN1MWP04001 364 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 OPN1MW2P0DN77 364 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 OPN1MW3P0DN78 364 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 SSTR5P35346 364 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 GABRA2P47869 451 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 SERF2P84101 59 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 Q6ZR03 302 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 PSMG3Q9BT73 122 aaPredicted RBP8.42□□□□□ -1.06
LIG3-201ENST00000262327 RTL8AQ9BWD3 113 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 OBP2BQ9NPH6 170 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 FUT9Q9Y231 359 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 CACNA1GO43497 2377 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 TRBV6-6A0A0A6YYG2 114 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 TRAV38-1A0A0B4J264 116 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 XKRY2A2RUG3 117 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 IFNA1P01562 189 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 S100A7P31151 101 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 MPV17P39210 176 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 CDKN1BP46527 198 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 BRWD1-AS2P59051 145 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 PPP1CBP62140 327 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 PRAMEF6Q5VXH4 476 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 ACTR3CQ9C0K3 210 aaPredicted RBP8.42□□□□□ -1.06
LIG3-201ENST00000262327 NAT8Q9UHE5 227 aa8.42□□□□□ -1.06
LIG3-201ENST00000262327 A0A0U1RQK1 487 aa8.41□□□□□ -1.06
LIG3-201ENST00000262327 HAND1O96004 215 aa8.41□□□□□ -1.06
LIG3-201ENST00000262327 AMBPP02760 352 aa8.41□□□□□ -1.06
LIG3-201ENST00000262327 OR4A8P0C604 315 aa8.41□□□□□ -1.06
LIG3-201ENST00000262327 SLC25A6P12236 298 aa8.41□□□□□ -1.06
LIG3-201ENST00000262327 CEACAM8P31997 349 aaPredicted RBP8.41□□□□□ -1.06
LIG3-201ENST00000262327 RPL29P47914 159 aaKnown RBP8.41□□□□□ -1.06
LIG3-201ENST00000262327 PSMB3P49720 205 aa8.41□□□□□ -1.06
LIG3-201ENST00000262327 OR13D1Q8NGV5 346 aa8.41□□□□□ -1.06
LIG3-201ENST00000262327 DERL1Q9BUN8 251 aa8.41□□□□□ -1.06
LIG3-201ENST00000262327 LPAR2Q9HBW0 351 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms