RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 ATP6V1FQ16864 119 aa14.63□□□□□ -0.07
TRAM1-201ENST00000262213 DCAF12Q5T6F0 453 aa14.63□□□□□ -0.07
TRAM1-201ENST00000262213 SNHG12Q9BXW3 62 aa14.63□□□□□ -0.07
TRAM1-201ENST00000262213 HAND1O96004 215 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 IGHEP01854 428 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 COL8A2P25067 703 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 NINJ1Q92982 152 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 TTTY12Q9BZ98 90 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 FAM234AQ9H0X4 552 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 MRPS18CQ9Y3D5 142 aaKnown RBP14.62□□□□□ -0.07
TRAM1-201ENST00000262213 HBZP02008 142 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 NUTF2P61970 127 aaKnown RBP14.62□□□□□ -0.07
TRAM1-201ENST00000262213 TRA2AQ13595 282 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAM1-201ENST00000262213 LBHQ53QV2 105 aaPredicted RBP14.62□□□□□ -0.07
TRAM1-201ENST00000262213 ABHD17BQ5VST6 288 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 MBNL3Q9NUK0 354 aaKnown RBP14.62□□□□□ -0.07
TRAM1-201ENST00000262213 LOXL2Q9Y4K0 774 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 A0A1W2PPV4 95 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 GABRA2P47869 451 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 CATR1Q13166 79 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 C6orf15Q6UXA7 325 aaPredicted RBP14.62□□□□□ -0.07
TRAM1-201ENST00000262213 SGMS2Q8NHU3 365 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 CDX2Q99626 313 aaPredicted RBP14.62□□□□□ -0.07
TRAM1-201ENST00000262213 MRPL37Q9BZE1 423 aaKnown RBP14.62□□□□□ -0.07
TRAM1-201ENST00000262213 POLDIP2Q9Y2S7 368 aa14.62□□□□□ -0.07
TRAM1-201ENST00000262213 THBS3P49746 956 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 OR1C1Q15619 314 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 TMEM251Q8N6I4 163 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 TMEM105Q8N8V8 129 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 C17orf112F2Z3M2 114 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 CD82P27701 267 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 CCKARP32238 428 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 SSPNQ14714 243 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 BEND2Q8NDZ0 799 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 MS4A10Q96PG2 267 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 QTRT1Q9BXR0 403 aaKnown RBP14.61□□□□□ -0.07
TRAM1-201ENST00000262213 POLR3KQ9Y2Y1 108 aaPredicted RBP14.61□□□□□ -0.07
TRAM1-201ENST00000262213 WIPI2Q9Y4P8 454 aa14.61□□□□□ -0.07
TRAM1-201ENST00000262213 LINC00473A8K010 186 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 VENTXO95231 258 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 SSTR5P35346 364 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 LPAL2Q16609 132 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 IMMP2LQ96T52 175 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 TMEM30CPA0ZSE6 113 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 RBFOX2O43251 390 aaKnown RBP eCLIP14.6□□□□□ -0.071e-8■■■□□ 14.9
TRAM1-201ENST00000262213 IGHV3-13P01766 116 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 IGHV3-7P01780 117 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 TYMSP04818 313 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 RPL29P47914 159 aaKnown RBP14.6□□□□□ -0.07
TRAM1-201ENST00000262213 RPL15P61313 204 aaKnown RBP14.6□□□□□ -0.07
TRAM1-201ENST00000262213 ERVK11-1P61568 191 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 NEU1Q99519 415 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 OBP2BQ9NPH6 170 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 PSG11Q9UQ72 335 aa14.6□□□□□ -0.07
TRAM1-201ENST00000262213 DCTN5Q9BTE1 182 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 NAGKQ9UJ70 344 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 F6UZH7 168 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 MLNRO43193 412 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 P0C879 139 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 ADMP35318 185 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 DUSP3P51452 185 aaPredicted RBP14.59□□□□□ -0.07
TRAM1-201ENST00000262213 TBC1D28Q2M2D7 210 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 ZNF705AQ6ZN79 300 aaPredicted RBP14.59□□□□□ -0.07
TRAM1-201ENST00000262213 DBX2Q6ZNG2 339 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 DEFB127Q9H1M4 99 aa14.59□□□□□ -0.07
TRAM1-201ENST00000262213 MDFIC2A0A1B0GVS7 189 aa14.58□□□□□ -0.07
TRAM1-201ENST00000262213 TGFBR3Q03167 851 aa14.58□□□□□ -0.07
TRAM1-201ENST00000262213 Q8IYB0 196 aa14.58□□□□□ -0.07
TRAM1-201ENST00000262213 SLC25A40Q8TBP6 338 aa14.58□□□□□ -0.07
TRAM1-201ENST00000262213 TBX15Q96SF7 602 aa14.58□□□□□ -0.07
TRAM1-201ENST00000262213 ZDBF2Q9HCK1 2354 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 C15orf62A8K5M9 175 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 CLDN14O95500 239 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 ARL14EPLP0DKL9 152 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 CD1BP29016 333 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 ZNF146Q15072 292 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 Q6ZR03 302 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 VKORC1L1Q8N0U8 176 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 ZDHHC11Q9H8X9 412 aa14.58□□□□□ -0.08
TRAM1-201ENST00000262213 TRBV20OR9-2A0A075B6H5 130 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 MARCH11A6NNE9 402 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 BCL2L2Q92843 193 aaPredicted RBP14.57□□□□□ -0.08
TRAM1-201ENST00000262213 SFRP2Q96HF1 295 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 GUCD1Q96NT3 240 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 CIB3Q96Q77 187 aaPredicted RBP14.57□□□□□ -0.08
TRAM1-201ENST00000262213 METRNQ9UJH8 293 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 FZR1Q9UM11 496 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 PXMP4Q9Y6I8 212 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 HCFC1P51610 2035 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 SCO2A0A1W2PP80 73 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 OR9G9P0C7N8 305 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 KITLGP21583 273 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 CBLN1P23435 193 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 LCN2P80188 198 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 GP6Q9HCN6 339 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 KMT2EQ8IZD2 1858 aa14.57□□□□□ -0.08
TRAM1-201ENST00000262213 M0R143 59 aa14.56□□□□□ -0.08
TRAM1-201ENST00000262213 RAB29O14966 203 aa14.56□□□□□ -0.08
TRAM1-201ENST00000262213 PDE6DO43924 150 aa14.56□□□□□ -0.08
TRAM1-201ENST00000262213 SMPD2O60906 423 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms