RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ZNF616Q08AN1 781 aa14.58□□□□□ -0.07
SSB-201ENST00000260956 Q3ZCU0 254 aa14.58□□□□□ -0.07
SSB-201ENST00000260956 DUX4L9Q6RFH8 374 aaPredicted RBP14.58□□□□□ -0.07
SSB-201ENST00000260956 PPP1R35Q8TAP8 253 aa14.58□□□□□ -0.07
SSB-201ENST00000260956 GAFA1Q96PS6 74 aa14.58□□□□□ -0.07
SSB-201ENST00000260956 LINC00574Q9H8X3 128 aa14.58□□□□□ -0.07
SSB-201ENST00000260956 A0A1W2PPR1 153 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 RAB29O14966 203 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 DFFBO76075 338 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 DUTP33316 252 aaKnown RBP14.58□□□□□ -0.08
SSB-201ENST00000260956 G6PCP35575 357 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 ZNF816Q0VGE8 651 aaPredicted RBP14.58□□□□□ -0.08
SSB-201ENST00000260956 ADIPOQQ15848 244 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 GUK1Q16774 197 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 OR2B11Q5JQS5 317 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 TEX36Q5VZQ5 186 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 ZNF561Q8N587 486 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 FAM213BQ8TBF2 198 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 TCTEX1D2Q8WW35 142 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 EDARADDQ8WWZ3 215 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 RBKSQ9H477 322 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 CALYQ9NYX4 217 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 PSENENQ9NZ42 101 aa14.58□□□□□ -0.08
SSB-201ENST00000260956 LRRC30A6NM36 301 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 PMS2P5A8MQ11 134 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 DEFB108AA8MXU0 73 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 OR8U8P0C7N1 319 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 ZNF134P52741 427 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 UBE2KP61086 200 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 NCR3LG1Q68D85 454 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 TMEM108Q6UXF1 575 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 ZNF788Q6ZQV5 615 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 TGIF2LYQ8IUE0 185 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 LFNGQ8NES3 379 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 OR4C12Q96R67 309 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 DCAF16Q9NXF7 216 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 GAB2Q9UQC2 676 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 DYSFO75923 2080 aa14.57□□□□□ -0.08
SSB-201ENST00000260956 METTL15P1P0C7V9 234 aa14.56□□□□□ -0.08
SSB-201ENST00000260956 C1orf229Q6ZS94 237 aaPredicted RBP14.56□□□□□ -0.08
SSB-201ENST00000260956 DDB2Q92466 427 aa14.56□□□□□ -0.08
SSB-201ENST00000260956 OR6C3Q9NZP0 311 aa14.56□□□□□ -0.08
SSB-201ENST00000260956 NDRG3Q9UGV2 375 aa14.56□□□□□ -0.08
SSB-201ENST00000260956 TSPAN4O14817 238 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 SNAPINO95295 136 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 KRASP01116 189 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 PRH1P02810 166 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 CCL20P78556 96 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 DPPA3Q6W0C5 159 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 SSX8Q7RTT4 187 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 ZNF439Q8NDP4 499 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 FAM234AQ9H0X4 552 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 A6NNC1 897 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 SLC31A2O15432 143 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 RBFOX2O43251 390 aaKnown RBP eCLIP14.55□□□□□ -0.08
SSB-201ENST00000260956 CYB5R3P00387 301 aaPredicted RBP14.55□□□□□ -0.08
SSB-201ENST00000260956 LOXP28300 417 aaPredicted RBP14.55□□□□□ -0.08
SSB-201ENST00000260956 TLE4Q04727 773 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 BSPH1Q075Z2 132 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 WFDC8Q8IUA0 241 aa14.55□□□□□ -0.08
SSB-201ENST00000260956 PSMG3Q9BT73 122 aaPredicted RBP14.55□□□□□ -0.08
SSB-201ENST00000260956 TRAV1-1A0A0B4J248 108 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 SELENOVP59797 346 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 LRRC75BQ2VPJ9 315 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 CBLN2Q8IUK8 224 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 CLRN3Q8NCR9 226 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 ZNF251Q9BRH9 671 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.54□□□□□ -0.08
SSB-201ENST00000260956 GFOD1Q9NXC2 390 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 GNG12Q9UBI6 72 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 LAMP3Q9UQV4 416 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 KPTNQ9Y664 436 aa14.54□□□□□ -0.08
SSB-201ENST00000260956 VPS13CQ709C8 3753 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 KBTBD11-OT1A0A1B0GTJ5 212 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 BTBD17A6NE02 478 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 FAM90A9PA6NNJ1 464 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 FCN3O75636 299 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 GPR12P47775 334 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 PEA15Q15121 130 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 HFEQ30201 348 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 CORO2AQ92828 525 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 KIAA1456Q9P272 454 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 CLN8Q9UBY8 286 aa14.53□□□□□ -0.08
SSB-201ENST00000260956 MARCH11A6NNE9 402 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 C17orf100A8MU93 164 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 OR4A8P0C604 315 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 LTC4SQ16873 150 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 PDLIM3Q53GG5 364 aaPredicted RBP14.52□□□□□ -0.08
SSB-201ENST00000260956 TMEM88Q6PEY1 159 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 CENPVQ7Z7K6 275 aaPredicted RBP14.52□□□□□ -0.08
SSB-201ENST00000260956 CD300LFQ8TDQ1 290 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 NRGNQ92686 78 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 DIRC2Q96SL1 478 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 RSG1Q9BU20 258 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 OTOGQ6ZRI0 2925 aa14.52□□□□□ -0.08
SSB-201ENST00000260956 OR9G9P0C7N8 305 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 MDKP21741 143 aaPredicted RBP14.52□□□□□ -0.09
SSB-201ENST00000260956 TNFSF4P23510 183 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 PPT1P50897 306 aa14.52□□□□□ -0.09
SSB-201ENST00000260956 EDDM3BP56851 147 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms