RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 COMPP49747 757 aaPredicted RBP10.08□□□□□ -0.8
SORL1-201ENST00000260197 KRTCAP3Q53RY4 240 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 PCGF1Q9BSM1 259 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 C5orf66Q9H5L9 145 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 OR5AC2Q9NZP5 309 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 KBTBD11O94819 623 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 ERVFRD-1P60508 538 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 NPVFQ9HCQ7 196 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 UBE2L6O14933 153 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 SPINT1O43278 529 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 RRN3P1Q2M238 152 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 TMEM56-RWDD3S4R434 201 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 SPTBN4Q9H254 2564 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 GAGE10A6NGK3 116 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 IFI6P09912 130 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 DANCRP0C864 163 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 FOXC1Q12948 553 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 ZNF430Q9H8G1 570 aaPredicted RBP10.08□□□□□ -0.8
SORL1-201ENST00000260197 IGKV1-8A0A0C4DH67 115 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 ERGP11308 486 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 PEBP1P30086 187 aaKnown RBP10.08□□□□□ -0.8
SORL1-201ENST00000260197 ZNF660Q6AZW8 331 aaPredicted RBP10.08□□□□□ -0.8
SORL1-201ENST00000260197 SFRP2Q96HF1 295 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 NUBP1P53384 320 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 OR4C12Q96R67 309 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 ZDHHC8Q9ULC8 765 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 MRPS16Q9Y3D3 137 aaKnown RBP10.08□□□□□ -0.8
SORL1-201ENST00000260197 MGAT2Q10469 447 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 ZNF273Q14593 569 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 RAXQ9Y2V3 346 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 B4E171 279 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 COL9A1P20849 921 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 TSPAN7P41732 249 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 PSG9Q00887 426 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 TNFRSF9Q07011 255 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 SAXO1Q8IYX7 474 aa10.08□□□□□ -0.8
SORL1-201ENST00000260197 C16orf97H3BN30 126 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 IFNL4K9M1U5 179 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 GLIPR1P48060 266 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 C16orf92Q96LL3 132 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 PIEZO1Q92508 2521 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 ZP4Q12836 540 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
SORL1-201ENST00000260197 FAM216AQ8WUB2 273 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 TRGC2P03986 189 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 DCAF10Q5QP82 559 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 FAM53AQ6NSI3 398 aaPredicted RBP10.07□□□□□ -0.8
SORL1-201ENST00000260197 GCSAMQ8N6F7 178 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 NPDC1Q9NQX5 325 aaPredicted RBP10.07□□□□□ -0.8
SORL1-201ENST00000260197 C19orf54Q5BKX5 351 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 LOC107984156A0A0G2JMH3 177 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 IGHMP01871 453 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 ARL17AQ8IVW1 177 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 WIPI2Q9Y4P8 454 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 H7C2G1 150 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 WNT9BO14905 357 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 PRDX2P32119 198 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 MAS1LP35410 378 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 ZAR1Q86SH2 424 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
SORL1-201ENST00000260197 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
SORL1-201ENST00000260197 MARS2Q96GW9 593 aaKnown RBP10.07□□□□□ -0.8
SORL1-201ENST00000260197 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
SORL1-201ENST00000260197 DXOO77932 396 aaKnown RBP10.06□□□□□ -0.8
SORL1-201ENST00000260197 IGKV1D-16P01601 117 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 FAM106CPP0CH98 169 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 SRSF5Q13243 272 aaKnown RBP10.06□□□□□ -0.8
SORL1-201ENST00000260197 RND1Q92730 232 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 MRPL13Q9BYD1 178 aaKnown RBP10.06□□□□□ -0.8
SORL1-201ENST00000260197 LINC00869P0C866 280 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 RUNX1Q01196 453 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 CIRBPQ14011 172 aaKnown RBP10.06□□□□□ -0.8
SORL1-201ENST00000260197 SMRP1Q8NCR6 262 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 RHOVQ96L33 236 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 PMCHL2Q9BQD1 86 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 LOC102724200A0A096LPH7 203 aaPredicted RBP10.06□□□□□ -0.8
SORL1-201ENST00000260197 LRRC75BQ2VPJ9 315 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 TMEM136Q6ZRR5 245 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 SPEM2Q0P670 501 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 GALNT14Q96FL9 552 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 TTTY12Q9BZ98 90 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 ERVH48-1M5A8F1 160 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 STPG3Q8N7X2 389 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 NRTNQ99748 197 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 KCNE5Q9UJ90 142 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 LNP1A1A4G5 178 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 J3KRW8 73 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 AGFG2O95081 481 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 SH3BGRL3Q9H299 93 aa10.06□□□□□ -0.8
SORL1-201ENST00000260197 OR2A4O95047 310 aa10.05□□□□□ -0.8
SORL1-201ENST00000260197 HOXD4P09016 255 aaPredicted RBP10.05□□□□□ -0.8
SORL1-201ENST00000260197 H2BFSP57053 126 aa10.05□□□□□ -0.8
SORL1-201ENST00000260197 OR2A7Q96R45 310 aa10.05□□□□□ -0.8
SORL1-201ENST00000260197 NPIPB13A6NJU9 1138 aa10.05□□□□□ -0.8
SORL1-201ENST00000260197 NPIPB4C9JG80 1138 aa10.05□□□□□ -0.8
SORL1-201ENST00000260197 TMEM30BQ3MIR4 351 aa10.05□□□□□ -0.8
SORL1-201ENST00000260197 DEFB124Q8NES8 71 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms