RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 YPEL4Q96NS1 127 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 CDCA3Q99618 268 aaPredicted RBP12.33□□□□□ -0.44
PRDM4-201ENST00000228437 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 SYNGR3O43761 229 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
PRDM4-201ENST00000228437 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
PRDM4-201ENST00000228437 SOX8P57073 446 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 RAC3P60763 192 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 GNB1P62873 340 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 ASPHD1Q5U4P2 390 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 PQLC2Q6ZP29 291 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 ABHD12Q8N2K0 398 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 FAM216AQ8WUB2 273 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 PCDH15Q96QU1 1955 aa12.33□□□□□ -0.44
PRDM4-201ENST00000228437 PRR14LQ5THK1 2151 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 ODAMA1E959 279 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 SNAI2O43623 268 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 TNFSF13O75888 250 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 FAM53AQ6NSI3 398 aaPredicted RBP12.32□□□□□ -0.44
PRDM4-201ENST00000228437 NRN1Q9NPD7 142 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 ASCL3Q9NQ33 180 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 IGKV1-5P01602 117 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 RELBQ01201 579 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 ALKBH6Q3KRA9 238 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 LINC01551Q86U37 167 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 ZNF114Q8NC26 417 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 WNK2Q9Y3S1 2297 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 IGKV1-6A0A0C4DH72 117 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 FKBP2P26885 142 aaKnown RBP12.32□□□□□ -0.44
PRDM4-201ENST00000228437 CFHR1Q03591 330 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 RELQ04864 619 aaPredicted RBP12.32□□□□□ -0.44
PRDM4-201ENST00000228437 LPAL2Q16609 132 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 ABLIM2Q6H8Q1 611 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 OR4A47Q6IF82 309 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 Q6ZWC4 215 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 TUSC5Q8IXB3 177 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 ALKBH7Q9BT30 221 aaPredicted RBP12.32□□□□□ -0.44
PRDM4-201ENST00000228437 PXMP4Q9Y6I8 212 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 PI4KAP42356 2102 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 DPRXA6NFQ7 191 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 CRYBB3P26998 211 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 ZNF826PQ6ZT77 177 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 ZNF441Q8N8Z8 693 aa12.32□□□□□ -0.44
PRDM4-201ENST00000228437 HELTA6NFD8 242 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 CA1P00915 261 aaPredicted RBP12.31□□□□□ -0.44
PRDM4-201ENST00000228437 LIFP15018 202 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 RAB30Q15771 203 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 NABP1Q96AH0 204 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 ABI3Q9P2A4 366 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 SPEGQ15772 3267 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 TRAV1-1A0A0B4J248 108 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 IL18BPO95998 194 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 MFAP2P55001 183 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 MRPL49Q13405 166 aaKnown RBP12.31□□□□□ -0.44
PRDM4-201ENST00000228437 CPEB3Q8NE35 698 aaKnown RBP12.31□□□□□ -0.44
PRDM4-201ENST00000228437 DUSP13Q9UII6 198 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 LCN2P80188 198 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 HIST3H3Q16695 136 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 RTL8AQ9BWD3 113 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 RNASE7Q9H1E1 156 aaKnown RBP12.31□□□□□ -0.44
PRDM4-201ENST00000228437 AKAP6Q13023 2319 aa12.31□□□□□ -0.44
PRDM4-201ENST00000228437 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 C2CD4DB7Z1M9 353 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 ZNF137PP52743 207 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 HAPLN4Q86UW8 402 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 CNEP1R1Q8N9A8 125 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 OR2D3Q8NGH3 330 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 RNF115Q9Y4L5 304 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 C17orf98A8MV24 154 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 CD99P14209 185 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 FOXG1P55316 489 aaPredicted RBP12.3□□□□□ -0.44
PRDM4-201ENST00000228437 C10orf128Q5T292 105 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 SPTA1P02549 2419 aa12.3□□□□□ -0.44
PRDM4-201ENST00000228437 EPOPA6NHQ4 379 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 FOXI3A8MTJ6 420 aaPredicted RBP12.29□□□□□ -0.44
PRDM4-201ENST00000228437 SPINT2O43291 252 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 OR2H2O95918 312 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
PRDM4-201ENST00000228437 GPR6P46095 362 aaPredicted RBP12.29□□□□□ -0.44
PRDM4-201ENST00000228437 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 KMT5CQ86Y97 462 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 UMODP07911 640 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 ZFP36L1Q07352 338 aaKnown RBP12.29□□□□□ -0.44
PRDM4-201ENST00000228437 KRTCAP3Q53RY4 240 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 SPINK14Q6IE38 97 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 DEFB108BQ8NET1 73 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 UQCRFS1P47985 274 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 CEACAM21Q3KPI0 293 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 RNF2Q99496 336 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 PKDREJQ9NTG1 2253 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 PRRC2CQ9Y520 2896 aaKnown RBP12.29□□□□□ -0.44
PRDM4-201ENST00000228437 RRHO14718 337 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 PRB4P10163 310 aaPredicted RBP12.29□□□□□ -0.44
PRDM4-201ENST00000228437 CYB561P49447 251 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 HOXA4Q00056 320 aaPredicted RBP12.29□□□□□ -0.44
PRDM4-201ENST00000228437 LDLRAD2Q5SZI1 272 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 STPG4Q8N801 248 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 OR5P3Q8WZ94 311 aa12.29□□□□□ -0.44
PRDM4-201ENST00000228437 TMEM54Q969K7 222 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms