RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 NQO2P16083 231 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 PRRX1P54821 245 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 VAMP2P63027 116 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 DHRS7BQ6IAN0 325 aaPredicted RBP13.69□□□□□ -0.22
TVP23C-201ENST00000225576 OR2C3Q8N628 320 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 ST8SIA2Q92186 375 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 RAB40CQ96S21 281 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 MALRD1Q5VYJ5 2156 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 IGHV2-26A0A0B4J1V2 119 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 SYNGR2O43760 224 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 SPDEFO95238 335 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 IL3RAP26951 378 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 ERVK-16P61578 105 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 STOML3Q8TAV4 291 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 CLEC7AQ9BXN2 247 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 BARX1Q9HBU1 254 aaPredicted RBP13.69□□□□□ -0.22
TVP23C-201ENST00000225576 LYRM2Q9NU23 88 aaPredicted RBP13.69□□□□□ -0.22
TVP23C-201ENST00000225576 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 COL12A1Q99715 3063 aa13.69□□□□□ -0.22
TVP23C-201ENST00000225576 YLPM1P49750 1951 aaKnown RBP13.68□□□□□ -0.22
TVP23C-201ENST00000225576 NXPH3O95157 252 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 IGLV1-47P01700 117 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 RRASP10301 218 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 POU2AF1Q16633 256 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 RTL8BQ17RB0 113 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 C1orf122Q6ZSJ8 110 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 BEND2Q8NDZ0 799 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 OR5AN1Q8NGI8 311 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 SCARB1Q8WTV0 552 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 BPESC1Q9GZL8 116 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 SLC25A31Q9H0C2 315 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 SLC35D1Q9NTN3 355 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 ONECUT1Q9UBC0 465 aa13.68□□□□□ -0.22
TVP23C-201ENST00000225576 USF3Q68DE3 2245 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 MED6O75586 246 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 TMEM50AO95807 157 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 CRYZL1O95825 349 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 HTR2BP41595 481 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 PAX9P55771 341 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 TAS2R30P59541 319 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 TNFRSF9Q07011 255 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 HLA-DRB5Q30154 266 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 AARDQ4LEZ3 155 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 Q8N7P7 452 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 PHYHIPLQ96FC7 376 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 PCGF1Q9BSM1 259 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 MRPL20Q9BYC9 149 aaKnown RBP13.67□□□□□ -0.22
TVP23C-201ENST00000225576 ITGB1BP2Q9UKP3 347 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 WSB1Q9Y6I7 421 aa13.67□□□□□ -0.22
TVP23C-201ENST00000225576 A1L4Q6 167 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 FAM24AA6NFZ4 105 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 A8MXK9 166 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 NDUFS8O00217 210 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 HRASP01112 189 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 APOA2P02652 100 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 GAPDHP04406 335 aaKnown RBP13.66□□□□□ -0.22
TVP23C-201ENST00000225576 CAV2P51636 162 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 UBE2KP61086 200 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 LMO4P61968 165 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 RPL23AP62750 156 aaKnown RBP13.66□□□□□ -0.22
TVP23C-201ENST00000225576 EIF5AP63241 154 aaKnown RBP13.66□□□□□ -0.22
TVP23C-201ENST00000225576 ZNF295-AS1Q8N0V1 137 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 OR8H3Q8N146 312 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 KIR3DL3Q8N743 410 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 CLDND2Q8NHS1 167 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 SMIM8Q96KF7 97 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 NABP2Q9BQ15 211 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 AIFM2Q9BRQ8 373 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 GSX2Q9BZM3 304 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 FBXL17Q9UF56 701 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 CACFD1Q9UGQ2 172 aa13.66□□□□□ -0.22
TVP23C-201ENST00000225576 H0YJW9 148 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 ENSAO43768 121 aaKnown RBP13.65□□□□□ -0.22
TVP23C-201ENST00000225576 OR9G9P0C7N8 305 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 TPT1P13693 172 aaKnown RBP13.65□□□□□ -0.22
TVP23C-201ENST00000225576 PAX1P15863 534 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 PRTN3P24158 256 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 ARF6P62330 175 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 EWSR1Q01844 656 aaKnown RBP eCLIP13.65□□□□□ -0.22
TVP23C-201ENST00000225576 ALKAL2Q6UX46 152 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 OR13D1Q8NGV5 346 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 MARVELD3Q96A59 401 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 RHOVQ96L33 236 aa13.65□□□□□ -0.22
TVP23C-201ENST00000225576 IGSF23A1L1A6 192 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 ARID1AO14497 2285 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 JTBO76095 146 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 ZFP36P26651 326 aaKnown RBP13.64□□□□□ -0.23
TVP23C-201ENST00000225576 ATP5J2P56134 94 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 NHLH2Q02577 135 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 BAXQ07812 192 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 CLLU1Q5K131 121 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 SSX9Q7RTT3 188 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 TGIF2LXQ8IUE1 241 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 BAP18Q8IXM2 172 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 OR11H6Q8NGC7 330 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 OSR1Q8TAX0 266 aaPredicted RBP13.64□□□□□ -0.23
TVP23C-201ENST00000225576 FAM168AQ92567 244 aa13.64□□□□□ -0.23
TVP23C-201ENST00000225576 PIMREGQ9BSJ6 248 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms