RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 MOGAT3Q86VF5 341 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 DKK4Q9UBT3 224 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 PROCRQ9UNN8 238 aa12.18□□□□□ -0.46
CNOT3-201ENST00000221232 A0A087WWC5 75 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 TRAV3A0A0B4J244 114 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 TRAV17A0A0B4J275 112 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 CRYAAP02489 173 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 SMIM6P0DI80 62 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-201ENST00000221232 DMRTC2Q8IXT2 367 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-201ENST00000221232 ZNF709Q8N972 641 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 FRZBQ92765 325 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 R3HDM4Q96D70 268 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 IGKV1D-17A0A075B6S4 117 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 TRAV38-1A0A0B4J264 116 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 PRR33A8MZF0 331 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 PAGE4O60829 102 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 TNFSF13O75888 250 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 ZNF134P52741 427 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 EIF4EBP1Q13541 118 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-201ENST00000221232 DUX4L9Q6RFH8 374 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-201ENST00000221232 BHLHA15Q7RTS1 189 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-201ENST00000221232 RAB24Q969Q5 203 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 PINX1Q96BK5 328 aaKnown RBP12.17□□□□□ -0.46
CNOT3-201ENST00000221232 TMEM204Q9BSN7 226 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 TMEM147Q9BVK8 224 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 GPR61Q9BZJ8 451 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 TOLLIPQ9H0E2 274 aa12.17□□□□□ -0.46
CNOT3-201ENST00000221232 ZNF71Q9NQZ8 489 aaPredicted RBP12.17□□□□□ -0.46
CNOT3-201ENST00000221232 DMXL2Q8TDJ6 3036 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 CLDN34H7C241 214 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-201ENST00000221232 CLDN14O95500 239 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 IFNA10P01566 189 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 TRGC1P0CF51 173 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 GUSBP1Q15486 140 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 ZNF124Q15973 351 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 ABHD5Q8WTS1 349 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 ZNF251Q9BRH9 671 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 AGMATQ9BSE5 352 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 PATZ1Q9HBE1 687 aaKnown RBP12.16□□□□□ -0.46
CNOT3-201ENST00000221232 ZFHX2Q9C0A1 2572 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-201ENST00000221232 PMS2P5A8MQ11 134 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 COX5AP20674 150 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 HOXA5P20719 270 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 MAS1LP35410 378 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 OR10D4PQ8NGN7 298 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 OR2V2Q96R30 315 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 SLC31A2O15432 143 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 WNT2P09544 360 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 PSMB3P49720 205 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 MEF2BQ02080 365 aaPredicted RBP12.16□□□□□ -0.46
CNOT3-201ENST00000221232 PRAMEF5Q5TYX0 476 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 SEM1Q6ZVN7 128 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 ABHD12Q8N2K0 398 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 ZBTB34Q8NCN2 500 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 NPCDR1Q9BY65 106 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 ASCL3Q9NQ33 180 aa12.16□□□□□ -0.46
CNOT3-201ENST00000221232 C15orf65H3BRN8 121 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 AQP7O14520 342 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 IFNA1P01562 189 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 SOD3P08294 240 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 P0C879 139 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 C1QL4Q86Z23 238 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 S100PBPQ96BU1 408 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 SIRT7Q9NRC8 400 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 PLSCR4Q9NRQ2 329 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 WASF3Q9UPY6 502 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 ADGRG4Q8IZF6 3080 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 ATMQ13315 3056 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 RAB29O14966 203 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 CYB5R3P00387 301 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-201ENST00000221232 NKX6-1P78426 367 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-201ENST00000221232 TMEM241Q24JQ0 296 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-201ENST00000221232 C16orf82Q7Z2V1 217 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 C1orf87Q8N0U7 546 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 OR51G1Q8NGK1 321 aa12.15□□□□□ -0.46
CNOT3-201ENST00000221232 HEYLQ9NQ87 328 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-201ENST00000221232 C1QTNF9BB2RNN3 333 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 KITLGP21583 273 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 CST9LP1Q5W188 147 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 SNX22Q96L94 193 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 LURAP1Q96LR2 239 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 ELOVL1Q9BW60 279 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 GAB2Q9UQC2 676 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 RRHO14718 337 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 OPN1MWP04001 364 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 HOXB1P14653 301 aaPredicted RBP12.14□□□□□ -0.47
CNOT3-201ENST00000221232 MYOD1P15172 320 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 S100A2P29034 98 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 DUTP33316 252 aaKnown RBP12.14□□□□□ -0.47
CNOT3-201ENST00000221232 MORN2Q502X0 79 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 PYY3Q5JQD4 70 aa12.14□□□□□ -0.47
CNOT3-201ENST00000221232 GCSAMQ8N6F7 178 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms