RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CADP27708 2225 aa3.81□□□□□ -1.8
CHD9-201ENST00000219084 J3QRE1 110 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 MYOGP15173 224 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 CFPP27918 469 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 MFAP2P55001 183 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 HOXA4Q00056 320 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 CIRBPQ14011 172 aaKnown RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 CYP2G1PQ6ZSU1 146 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 C11orf42Q8N5U0 333 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 WNT2BQ93097 391 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 GUCD1Q96NT3 240 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 TMEM189A5PLL7 270 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 TRGC1P0CF51 173 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 ARL14EPLP0DKL9 152 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 CCL1P22362 96 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 PRDX2P32119 198 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 HERPUD1Q15011 391 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 C9orf152Q5JTZ5 239 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 SFTPA2Q8IWL1 248 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 SFTPA1Q8IWL2 248 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 GATAD1Q8WUU5 269 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 HSPB9Q9BQS6 159 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 COA4Q9NYJ1 87 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 SIRT4Q9Y6E7 314 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 ZNF729A6NN14 1252 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 C1QTNF9BB2RNN3 333 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 DNASE2O00115 360 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 TRGC2P03986 189 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 COL4A5P29400 1685 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 LRRC75BQ2VPJ9 315 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 ZNF385CQ66K41 422 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 TUSC5Q8IXB3 177 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 APCDD1LQ8NCL9 501 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 RNASEH2CQ8TDP1 164 aaKnown RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 TMEM186Q96B77 213 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 ZNF501Q96CX3 271 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 TLNRD1Q9H1K6 362 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 ODAMA1E959 279 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 F2RL2O00254 374 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 C8orf88P0DMB2 117 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 GNG10P50151 68 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 LINC01590Q5TEZ4 76 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 ZNF788Q6ZQV5 615 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 OR8I2Q8N0Y5 310 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 MEGF10Q96KG7 1140 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 SH3BGRL2Q9UJC5 107 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 TGIF2-C20orf24A0A0A6YYL0 155 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 CDIPTO14735 213 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 LPAL2Q16609 132 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 BATF2Q8N1L9 274 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 LRTM2Q8N967 370 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 PLA2G2FQ9BZM2 168 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 ZNF256Q9Y2P7 627 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 AUP1Q9Y679 476 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 LOC105371267A0A1B0GV96 52 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 DEFB108AA8MXU0 73 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 FAM106CPP0CH98 169 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 IGFBP3P17936 291 aaPredicted RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 HSPE1P61604 102 aaKnown RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 COL10A1Q03692 680 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 OR10J3Q5JRS4 329 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 OTPQ5XKR4 325 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 TMEM92Q6UXU6 159 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 OR51G1Q8NGK1 321 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 APOBEC4Q8WW27 367 aaKnown RBP3.8□□□□□ -1.8
CHD9-201ENST00000219084 IGLV3-32A0A0A0MS00 114 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 UCP1P25874 307 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 RNFT1Q5M7Z0 435 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 TMEM78Q5T7P6 136 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 ATP5L2Q7Z4Y8 100 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 SSMEM1Q8WWF3 244 aa3.8□□□□□ -1.8
CHD9-201ENST00000219084 TRBV23-1A0A0A0MS06 115 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 PPIHO43447 177 aaKnown RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 SS18L1O75177 396 aaPredicted RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 NDUFB4O95168 129 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 GHRHP01286 108 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 IGLV3-19P01714 112 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 TSPOP30536 169 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 UCP2P55851 309 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 RPL31P62899 125 aaKnown RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 OR10J6PQ8NGY7 276 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 ELOVL5Q9NYP7 299 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 HCFC1P51610 2035 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 ATP5LO75964 103 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 OR2H2O95918 312 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 LINC00869P0C866 280 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 PPP1CCP36873 323 aaKnown RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 PLP1P60201 277 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 C2orf68Q2NKX9 166 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 ZXDCQ2QGD7 858 aaPredicted RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 SPNS3Q6ZMD2 512 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 OR1K1Q8NGR3 316 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 OR5P3Q8WZ94 311 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 RAB37Q96AX2 223 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 SPANXDQ9BXN6 97 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 PARLQ9H300 379 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 ZNF703Q9H7S9 590 aaPredicted RBP3.79□□□□□ -1.8
CHD9-201ENST00000219084 IL36RNQ9UBH0 155 aa3.79□□□□□ -1.8
CHD9-201ENST00000219084 NPIPB6E9PJ23 425 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms