RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 WDR54Q9H977 334 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 GPR27Q9NS67 375 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 C17orf112F2Z3M2 114 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 GATA2P23769 480 aaPredicted RBP12.45□□□□□ -0.42
PTPRA-201ENST00000216877 F2RP25116 425 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 PAX2Q02962 417 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 LRRC10Q5BKY1 277 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 Q6ZS52 159 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 TMEM144Q7Z5S9 345 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 KCNE4Q8WWG9 221 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 OR8B2Q96RD0 313 aa12.45□□□□□ -0.42
PTPRA-201ENST00000216877 C19orf25Q9UFG5 118 aaPredicted RBP12.45□□□□□ -0.42
PTPRA-201ENST00000216877 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 C22orf46C9J442 243 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 YPEL3P61236 119 aaPredicted RBP12.44□□□□□ -0.42
PTPRA-201ENST00000216877 ASPHD1Q5U4P2 390 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 KIAA0895LQ68EN5 471 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 DTX1Q86Y01 620 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 YLPM1P49750 1951 aaKnown RBP12.44□□□□□ -0.42
PTPRA-201ENST00000216877 UCP1P25874 307 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 TIMP3P35625 211 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 SCGB2A2Q13296 93 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 OR5B3Q8NH48 314 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 NBEAP1P0C6P0 100 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 CAMPP49913 170 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 DOLPP1Q86YN1 238 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 ZNF331Q9NQX6 463 aaPredicted RBP12.44□□□□□ -0.42
PTPRA-201ENST00000216877 IL36BQ9NZH7 164 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 ABI3Q9P2A4 366 aa12.44□□□□□ -0.42
PTPRA-201ENST00000216877 NCOA6Q14686 2063 aaPredicted RBP12.43□□□□□ -0.42
PTPRA-201ENST00000216877 TMEM238LA0A1B0GVL6 79 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 PDE6DO43924 150 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 TFF2Q03403 129 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 PDLIM3Q53GG5 364 aaPredicted RBP12.43□□□□□ -0.42
PTPRA-201ENST00000216877 SP5Q6BEB4 398 aaPredicted RBP12.43□□□□□ -0.42
PTPRA-201ENST00000216877 CENPVQ7Z7K6 275 aaPredicted RBP12.43□□□□□ -0.42
PTPRA-201ENST00000216877 RALGAPA1Q6GYQ0 2036 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 ABCA7Q8IZY2 2146 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 EPOPA6NHQ4 379 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 FOXI3A8MTJ6 420 aaPredicted RBP12.43□□□□□ -0.42
PTPRA-201ENST00000216877 TNFP01375 233 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 NPY1RP25929 384 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 CLDN18P56856 261 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 CNN3Q15417 329 aaKnown RBP12.43□□□□□ -0.42
PTPRA-201ENST00000216877 SLC25A34Q6PIV7 304 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 Q8N976 141 aa12.43□□□□□ -0.42
PTPRA-201ENST00000216877 C3orf80F5H4A9 247 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 MORN2Q502X0 79 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 TMEM196Q5HYL7 178 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 A0A1B0GV72 72 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 OR4C46A6NHA9 309 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 ALG1L2C9J202 215 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 PIAS2O75928 621 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 GPR6P46095 362 aaPredicted RBP12.42□□□□□ -0.42
PTPRA-201ENST00000216877 DEFB133Q30KQ1 61 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 PNKDQ8N490 385 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 SVILO95425 2214 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 IGHV3-15A0A0B4J1V0 119 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 H3BUT2 72 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 TNFSF14O43557 240 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 GJC3Q8NFK1 279 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 FLVCR1-AS1Q8TAF5 88 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 TSKUQ8WUA8 353 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 RNASE7Q9H1E1 156 aaKnown RBP12.42□□□□□ -0.42
PTPRA-201ENST00000216877 THYN1Q9P016 225 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 PEF1Q9UBV8 284 aaKnown RBP12.42□□□□□ -0.42
PTPRA-201ENST00000216877 CACNA1HO95180 2353 aa12.42□□□□□ -0.42
PTPRA-201ENST00000216877 IGKV1-12A0A0C4DH73 117 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 C7orf71A4D174 169 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 NPIPA3F8WFD2 350 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 IGKV1D-12P01611 117 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 UBE2G1P62253 170 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 ZNF816Q0VGE8 651 aaPredicted RBP12.41□□□□□ -0.42
PTPRA-201ENST00000216877 ZIC4Q8N9L1 334 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 SLC37A2Q8TED4 501 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 SPTSSAQ969W0 71 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 ABHD14BQ96IU4 210 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 HILPDAQ9Y5L2 63 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 COL4A2P08572 1712 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 TRBV20OR9-2A0A075B6H5 130 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 NEURL1O76050 574 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 CA1P00915 261 aaPredicted RBP12.41□□□□□ -0.42
PTPRA-201ENST00000216877 APCSP02743 223 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 RPL31P62899 125 aaKnown RBP12.41□□□□□ -0.42
PTPRA-201ENST00000216877 TNXAQ16473 311 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 C12orf54Q6X4T0 127 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 NINJ1Q92982 152 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 DEPPQ9NTK1 212 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 IGKV1-27A0A075B6S5 117 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 CELA3BP08861 270 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 MUC15Q8N387 334 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 OR8B3Q8NGG8 313 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 NEUROG1Q92886 237 aa12.41□□□□□ -0.42
PTPRA-201ENST00000216877 SSBP3Q9BWW4 388 aaPredicted RBP12.41□□□□□ -0.42
PTPRA-201ENST00000216877 SH2D7A6NKC9 451 aaPredicted RBP12.4□□□□□ -0.42
PTPRA-201ENST00000216877 ZNF207O43670 478 aaKnown RBP12.4□□□□□ -0.42
PTPRA-201ENST00000216877 ARR3P36575 388 aa12.4□□□□□ -0.42
PTPRA-201ENST00000216877 HHEXQ03014 270 aa12.4□□□□□ -0.42
PTPRA-201ENST00000216877 C1orf53Q5VUE5 145 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms