RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 RBPMSQ93062 196 aaKnown RBP13.41□□□□□ -0.26
POLR2E-201ENST00000215587 MALSU1Q96EH3 234 aa13.41□□□□□ -0.26
POLR2E-201ENST00000215587 TMEM56Q96MV1 263 aa13.41□□□□□ -0.26
POLR2E-201ENST00000215587 MGAT4CQ9UBM8 478 aa13.41□□□□□ -0.26
POLR2E-201ENST00000215587 TMEM56-RWDD3S4R434 201 aa13.41□□□□□ -0.26
POLR2E-201ENST00000215587 DUXBA0A1W2PPF3 345 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 A0A1W2PPI3 338 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 H0YJW9 148 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 H7C2Y5 167 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 GOSR2O14653 212 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 CD5LO43866 347 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 RAMP3O60896 148 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 CDS2O95674 445 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 AVPP01185 164 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 IFNA21P01568 189 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 TRAPPC2P0DI81 140 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 TRAPPC2BP0DI82 140 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 BPIFB3P59826 476 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 FCN2Q15485 313 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 SSX2Q16385 188 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 ZNF585BQ52M93 769 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 LDLRAD2Q5SZI1 272 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 RUSC1-AS1Q66K80 236 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 SELENOHQ8IZQ5 122 aaKnown RBP13.4□□□□□ -0.26
POLR2E-201ENST00000215587 OR5AN1Q8NGI8 311 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
POLR2E-201ENST00000215587 PLEKHA2Q9HB19 425 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 RAB18Q9NP72 206 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 COMMD9Q9P000 198 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 WASHC3Q9Y3C0 194 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 NBEAL1Q6ZS30 2694 aa13.4□□□□□ -0.26
POLR2E-201ENST00000215587 DBX1A6NMT0 343 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 S1PR2O95136 353 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 CRYZL1O95825 349 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 HPRT1P00492 218 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 HOXB5P09067 269 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 SULT1A3P0DMM9 295 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 SULT1A4P0DMN0 295 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 AKR1C2P52895 323 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 KLF17Q5JT82 389 aaPredicted RBP13.39□□□□□ -0.27
POLR2E-201ENST00000215587 PDPNQ86YL7 162 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 SLC35G3Q8N808 338 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 LHFPL5Q8TAF8 219 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 NANPQ8TBE9 248 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 CHAC2Q8WUX2 184 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 C18orf12Q96KH6 178 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 GSX1Q9H4S2 264 aaPredicted RBP13.39□□□□□ -0.27
POLR2E-201ENST00000215587 CSPG4Q6UVK1 2322 aa13.39□□□□□ -0.27
POLR2E-201ENST00000215587 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.38□□□□□ -0.273e-7■■■■□ 24.8
POLR2E-201ENST00000215587 TIMM23O14925 209 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 ADAP1O75689 374 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 FOSL1P15407 271 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 BRWD1-AS2P59051 145 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 ERVK-16P61578 105 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 BRD3OSQ6XYD6 125 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 LYZL2Q7Z4W2 148 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 RRNAD1Q96FB5 475 aaKnown RBP13.38□□□□□ -0.27
POLR2E-201ENST00000215587 FAM96BQ9Y3D0 163 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 TMED3Q9Y3Q3 217 aa13.38□□□□□ -0.27
POLR2E-201ENST00000215587 WNK2Q9Y3S1 2297 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 IGHV3-72A0A0B4J1Y9 119 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 C5orf51A6NDU8 294 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 FAM25EA8MYX2 175 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 CCSO14618 274 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 HRASP01112 189 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 IGKV1-39P01597 117 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 IGKV1D-39P04432 117 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 HLA-GP17693 338 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 VDAC1P21796 283 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 CD1BP29016 333 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 BRS3P32247 399 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 GGNBP1Q5YKI7 109 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 GSG1LQ6UXU4 331 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 OR11H7Q8NGC8 314 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 OR4C13Q8NGP0 309 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 OR5M8Q8NGP6 311 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 C17orf50Q8WW18 174 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 FLYWCH2Q96CP2 140 aaKnown RBP13.37□□□□□ -0.27
POLR2E-201ENST00000215587 R3HDM4Q96D70 268 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 AIFM2Q9BRQ8 373 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 NUP50Q9UKX7 468 aa13.37□□□□□ -0.27
POLR2E-201ENST00000215587 C13orf42A0A1B0GVH6 325 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 SHOXO15266 292 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 KRASP01116 189 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 FSHBP01225 129 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 NQO2P16083 231 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 RPS16P62249 146 aaKnown RBP13.36□□□□□ -0.27
POLR2E-201ENST00000215587 KRTAP1-1Q07627 177 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 C2orf68Q2NKX9 166 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 AKAP14Q86UN6 197 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 DYNAPQ8N1N2 210 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 OSR1Q8TAX0 266 aaPredicted RBP13.36□□□□□ -0.27
POLR2E-201ENST00000215587 LSM10Q969L4 123 aaKnown RBP13.36□□□□□ -0.27
POLR2E-201ENST00000215587 AJUBAQ96IF1 538 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 HARBI1Q96MB7 349 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 SPIN2AQ99865 258 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 SPIN2BQ9BPZ2 258 aa13.36□□□□□ -0.27
POLR2E-201ENST00000215587 PDCD10Q9BUL8 212 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms