RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 CRYBA1P05813 215 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 AWAT1Q58HT5 328 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 CT45A1Q5HYN5 189 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 AVPI1Q5T686 147 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 CT45A3Q8NHU0 189 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 QTRT1Q9BXR0 403 aaKnown RBP21.53■■□□□ 1.04
RTN4R-201ENST00000043402 PARD6GQ9BYG4 376 aaPredicted RBP21.53■■□□□ 1.04
RTN4R-201ENST00000043402 SMDT1Q9H4I9 107 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 GFOD1Q9NXC2 390 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 HPRT1P00492 218 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 ZNF726P1Q15940 193 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 ZNF665Q9H7R5 613 aa21.53■■□□□ 1.04
RTN4R-201ENST00000043402 TEX36Q5VZQ5 186 aa21.52■■□□□ 1.04
RTN4R-201ENST00000043402 TAF15Q92804 592 aaKnown RBP eCLIP21.52■■□□□ 1.04
RTN4R-201ENST00000043402 C20orf24Q9BUV8 137 aa21.52■■□□□ 1.04
RTN4R-201ENST00000043402 COLCA2A8K830 154 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 C17orf100A8MU93 164 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 RPS16P62249 146 aaKnown RBP21.51■■□□□ 1.03
RTN4R-201ENST00000043402 ADAM5Q6NVV9 412 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 SSX9Q7RTT3 188 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 CLDND2Q8NHS1 167 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 TRGV10A0A0A0MS01 117 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 OR2B8PP59922 312 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 SSX7Q7RTT5 188 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 VKORC1L1Q8N0U8 176 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 RPS10P5Q9NQ39 176 aa21.51■■□□□ 1.03
RTN4R-201ENST00000043402 TRAV1-1A0A0B4J248 108 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 ITGB1BP1O14713 200 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 SERF2P84101 59 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 ICAM4Q14773 271 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 DDB2Q92466 427 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 C7orf77A4D0Y5 90 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 CEBPZOSA8MTT3 80 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 HBE1P02100 147 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 SNRNP70P08621 437 aaKnown RBP21.5■■□□□ 1.03
RTN4R-201ENST00000043402 IRF2P14316 349 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 RBMXL1Q96E39 390 aaKnown RBP21.5■■□□□ 1.03
RTN4R-201ENST00000043402 WFIKKN1Q96NZ8 548 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 BIN3Q9NQY0 253 aa21.5■■□□□ 1.03
RTN4R-201ENST00000043402 RBFOX2O43251 390 aaKnown RBP eCLIP21.49■■□□□ 1.03
RTN4R-201ENST00000043402 MMP23AO75900 390 aa21.49■■□□□ 1.03
RTN4R-201ENST00000043402 SCAF4O95104 1147 aaKnown RBP21.49■■□□□ 1.03
RTN4R-201ENST00000043402 SRP19P09132 144 aaKnown RBP21.49■■□□□ 1.03
RTN4R-201ENST00000043402 HNF4GQ14541 408 aa21.49■■□□□ 1.03
RTN4R-201ENST00000043402 AARDQ4LEZ3 155 aa21.49■■□□□ 1.03
RTN4R-201ENST00000043402 CIB3Q96Q77 187 aaPredicted RBP21.49■■□□□ 1.03
RTN4R-201ENST00000043402 GAB2Q9UQC2 676 aa21.49■■□□□ 1.03
RTN4R-201ENST00000043402 YLPM1P49750 1951 aaKnown RBP21.49■■□□□ 1.03
RTN4R-201ENST00000043402 SAA2-SAA4A0A096LPE2 208 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 FBP1P09467 338 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 SAA2P0DJI9 122 aaPredicted RBP21.48■■□□□ 1.03
RTN4R-201ENST00000043402 PAX6P26367 422 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 PLA2G5P39877 138 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 HOXA1P49639 335 aaPredicted RBP21.48■■□□□ 1.03
RTN4R-201ENST00000043402 SOHLH1Q5JUK2 328 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 ZNF506Q5JVG8 444 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 C15orf54Q8N8G6 183 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 KDF1Q8NAX2 398 aaPredicted RBP21.48■■□□□ 1.03
RTN4R-201ENST00000043402 ZNF251Q9BRH9 671 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 MSRB2Q9Y3D2 182 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 PKDREJQ9NTG1 2253 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 M0R036 132 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 TNFRSF1AP19438 455 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 RAB7AP51149 207 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 RCC1LQ96I51 464 aaKnown RBP21.48■■□□□ 1.03
RTN4R-201ENST00000043402 CLCC1Q96S66 551 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 S1PR3Q99500 378 aa21.48■■□□□ 1.03
RTN4R-201ENST00000043402 ELLP55199 621 aaPredicted RBP21.47■■□□□ 1.03
RTN4R-201ENST00000043402 ZNF439Q8NDP4 499 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 OR10P1Q8NGE3 313 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 MBD3L1Q8WWY6 194 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 TMPRSS2O15393 492 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 DAOP14920 347 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 RAB2AP61019 212 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 PRAMEF5Q5TYX0 476 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 LCN15Q6UWW0 184 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 RND1Q92730 232 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 DIRC2Q96SL1 478 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 LINC00574Q9H8X3 128 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 RAB9BQ9NP90 201 aa21.47■■□□□ 1.03
RTN4R-201ENST00000043402 TET2Q6N021 2002 aaPredicted RBP21.47■■□□□ 1.03
RTN4R-201ENST00000043402 TRAV3A0A0B4J244 114 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 ATP6V1FQ16864 119 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 CENPVQ7Z7K6 275 aaPredicted RBP21.46■■□□□ 1.03
RTN4R-201ENST00000043402 CORO2AQ92828 525 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 TMEM147Q9BVK8 224 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 IDI2-AS1Q9NZ38 188 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 POLEQ07864 2286 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 FAM90A9PA6NNJ1 464 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 C15orf62A8K5M9 175 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 IFNA17P01571 189 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 IGKV1D-33P01593 117 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 IGKV1-33P01594 117 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 TMEM41BQ5BJD5 291 aa21.46■■□□□ 1.03
RTN4R-201ENST00000043402 ZNF729A6NN14 1252 aaPredicted RBP21.45■■□□□ 1.02
RTN4R-201ENST00000043402 EIF3GO75821 320 aaKnown RBP eCLIP21.45■■□□□ 1.02
RTN4R-201ENST00000043402 HSPB1P04792 205 aaKnown RBP21.45■■□□□ 1.02
RTN4R-201ENST00000043402 FOLR2P14207 255 aa21.45■■□□□ 1.02
RTN4R-201ENST00000043402 AKR1D1P51857 326 aa21.45■■□□□ 1.02
RTN4R-201ENST00000043402 FGF8P55075 233 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms