RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 FAM53AQ6NSI3 398 aaPredicted RBP18.14■□□□□ 0.49
HOXC8-201ENST00000040584 CLEC9AQ6UXN8 241 aa18.14■□□□□ 0.49
HOXC8-201ENST00000040584 AKR1E2Q96JD6 320 aa18.14■□□□□ 0.49
HOXC8-201ENST00000040584 TUBA4BQ9H853 241 aa18.14■□□□□ 0.49
HOXC8-201ENST00000040584 CCL28Q9NRJ3 127 aa18.14■□□□□ 0.49
HOXC8-201ENST00000040584 NBPF19A0A087WUL8 3843 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 A0A1B0GU03 582 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 FAM24AA6NFZ4 105 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 F2RP25116 425 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 PDLIM4P50479 330 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 TMEM252Q8N6L7 170 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 OR8B3Q8NGG8 313 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 NEIL1Q96FI4 390 aaPredicted RBP18.13■□□□□ 0.49
HOXC8-201ENST00000040584 OR8B2Q96RD0 313 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 EIF5A2Q9GZV4 153 aaKnown RBP18.13■□□□□ 0.49
HOXC8-201ENST00000040584 BIN3Q9NQY0 253 aa18.13■□□□□ 0.49
HOXC8-201ENST00000040584 hADV38S2A0JD32 116 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 WRBO00258 174 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 HSD17B6O14756 317 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 SPINT2O43291 252 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 FOLR2P14207 255 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 POLR2GP62487 172 aaKnown RBP eCLIP18.12■□□□□ 0.49
HOXC8-201ENST00000040584 LTC4SQ16873 150 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 C17orf58Q2M2W7 97 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 HSD17B11Q8NBQ5 300 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 OR52L2PQ8NGH6 319 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 BPESC1Q9GZL8 116 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 CALYQ9NYX4 217 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 CSMD2Q7Z408 3487 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 IGKV1D-13A0A0B4J2D9 117 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 IGKV1-13P0DP09 117 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 OMGP23515 440 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 RAB13P51153 203 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 MEF2CQ06413 473 aaPredicted RBP18.12■□□□□ 0.49
HOXC8-201ENST00000040584 TMEM200BQ69YZ2 307 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 CORO2AQ92828 525 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 SCRT1Q9BWW7 348 aa18.12■□□□□ 0.49
HOXC8-201ENST00000040584 PATZ1Q9HBE1 687 aaKnown RBP18.12■□□□□ 0.49
HOXC8-201ENST00000040584 IGHV3-43A0A0B4J1X8 118 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 C9JQL5 133 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 IGHV3-43DP0DP04 118 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 CEACAM6P40199 344 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 HOXA1P49639 335 aaPredicted RBP18.11■□□□□ 0.49
HOXC8-201ENST00000040584 PPT1P50897 306 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 HTD2P86397 168 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 DPPA3Q6W0C5 159 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 TOLLIPQ9H0E2 274 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 SLC35B3Q9H1N7 401 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 CLN8Q9UBY8 286 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 LINC00312Q9Y6C7 94 aa18.11■□□□□ 0.49
HOXC8-201ENST00000040584 KBTBD11-OT1A0A1B0GTJ5 212 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 IGSF23A1L1A6 192 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 SSSCA1O60232 199 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 RNF212Q495C1 297 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 WDR25Q64LD2 544 aaPredicted RBP18.1■□□□□ 0.49
HOXC8-201ENST00000040584 OR2G3Q8NGZ4 309 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 PARP12Q9H0J9 701 aaKnown RBP18.1■□□□□ 0.49
HOXC8-201ENST00000040584 LINC00574Q9H8X3 128 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 UNKLQ9H9P5 680 aaKnown RBP18.1■□□□□ 0.49
HOXC8-201ENST00000040584 MALRD1Q5VYJ5 2156 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 ABCA12Q86UK0 2595 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 POLQO75417 2590 aa18.1■□□□□ 0.49
HOXC8-201ENST00000040584 FASNP49327 2511 aaKnown RBP18.1■□□□□ 0.49
HOXC8-201ENST00000040584 SERPINE2P07093 398 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 PAX1P15863 534 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 NFYBP25208 207 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 OR10V1Q8NGI7 309 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 FAM168AQ92567 244 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 HIPK2Q9H2X6 1198 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 DOCK11Q5JSL3 2073 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 ASH1LQ9NR48 2969 aaKnown RBP18.09■□□□□ 0.49
HOXC8-201ENST00000040584 F2RL2O00254 374 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 DFFBO76075 338 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 CCL3L1P16619 93 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 PPP1CCP36873 323 aaKnown RBP18.09■□□□□ 0.49
HOXC8-201ENST00000040584 RPL23AP62750 156 aaKnown RBP18.09■□□□□ 0.49
HOXC8-201ENST00000040584 CXorf66Q5JRM2 361 aaPredicted RBP18.09■□□□□ 0.49
HOXC8-201ENST00000040584 TMEM182Q6ZP80 229 aaPredicted RBP18.09■□□□□ 0.49
HOXC8-201ENST00000040584 LSM10Q969L4 123 aaKnown RBP18.09■□□□□ 0.49
HOXC8-201ENST00000040584 RAB40CQ96S21 281 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 SH3BGRL3Q9H299 93 aa18.09■□□□□ 0.49
HOXC8-201ENST00000040584 SAV1Q9H4B6 383 aaPredicted RBP18.09■□□□□ 0.49
HOXC8-201ENST00000040584 ZNF729A6NN14 1252 aaPredicted RBP18.08■□□□□ 0.49
HOXC8-201ENST00000040584 COLCA2A8K830 154 aa18.08■□□□□ 0.49
HOXC8-201ENST00000040584 ATP6V0CP27449 155 aa18.08■□□□□ 0.49
HOXC8-201ENST00000040584 ERVFRD-1P60508 538 aa18.08■□□□□ 0.49
HOXC8-201ENST00000040584 RAB2AP61019 212 aa18.08■□□□□ 0.49
HOXC8-201ENST00000040584 FAM213BQ8TBF2 198 aa18.08■□□□□ 0.49
HOXC8-201ENST00000040584 RXFP4Q8TDU9 374 aa18.08■□□□□ 0.49
HOXC8-201ENST00000040584 VPS13CQ709C8 3753 aa18.08■□□□□ 0.48
HOXC8-201ENST00000040584 LOXL3P58215 753 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 GNB2P62879 340 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 CLEC2AQ6UVW9 174 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 LINC00518Q8N0U6 118 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 OR5C1Q8NGR4 320 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 NINJ1Q92982 152 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 RAB9BQ9NP90 201 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 TRBV23-1A0A0A0MS06 115 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 GPR37O15354 613 aa18.07■□□□□ 0.48
HOXC8-201ENST00000040584 CHST1O43916 411 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms