RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Utp23Q9CX11 249 aaKnown RBP13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Mpc2Q9D023 127 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Zfp971A2BFG8 470 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Ascl4M0QW46 144 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Hoxa1P09022 331 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Fcgr1P26151 404 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Chrna7P49582 502 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Dbx1P52950 335 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Npas1P97459 594 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Zfp970Q08BU3 522 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Thap4Q6P3Z3 569 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr786Q8VFH8 312 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Rnf2Q9CQJ4 336 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr432E9Q8M2 312 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Spsb2O88838 264 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Slc46a1Q6PEM8 459 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Wdr13Q91V09 485 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Ethe1Q9DCM0 254 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Hsd17b6Q9R092 317 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Zfp109A0A0U1RPC5 652 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 CrpP14847 225 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gpr6Q6YNI2 363 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Asphd2Q80VP9 343 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gucd1Q8BZI6 239 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Anapc16Q9CPV2 110 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 1700029F12RikQ9CRB4 147 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Srxn1Q9D975 136 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Shroom3Q9QXN0 1986 aa13.74□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Ogg1O08760 345 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Dlx4P70436 240 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Masp1P98064 704 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Ifna12Q80SS5 189 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr1445Q8VFW9 314 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr181Q8VGQ7 317 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Wdr20Q9D5R2 567 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Fbxl6Q9QXW0 535 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gon4lQ9DB00 2260 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Mn1D3YWE6 1297 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Ccl4P14097 92 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 TspoP50637 169 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Parp11Q8CFF0 331 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr303Q8VFP0 319 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 S1pr5Q91X56 400 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Vps25Q9CQ80 176 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Ltbp4Q8K4G1 1666 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm29049A0A087WSM5 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 2010106E10RikA2ANY3 279 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Tmem74bA2AU34 232 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm21118J3QPK8 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Fabp9O08716 132 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Obox7Q4KL20 218 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm20909Q5FWB5 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm20852Q5M8R5 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm20917Q62457 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm20809Q62458 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm20865Q62460 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm20738Q810R8 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 RhofQ8BYP3 211 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm20806Q9D9T3 227 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Myf5P24699 255 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Rom1P32958 351 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm10750Q3V0I0 133 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm10334Q792Y8 246 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Harbi1Q8BR93 349 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr1184Q8VG86 311 aa13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Fam103a1Q9CQY2 119 aaKnown RBP13.73□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 H2-DMaP28078 261 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 VhlP40338 181 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Polr2gP62488 172 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Prrx1P63013 245 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Sf3a2Q62203 475 aaKnown RBP13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Lrfn3Q8BLY3 626 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Klre1Q8CJC7 226 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Tctex1d1Q9D5I4 173 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Ighv1-13A0A075B5I0 98 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm14409A2ARR8 349 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 A6H6Q4 206 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr102B2RT33 308 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Gm20403G3UYB0 123 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Upk2P38575 184 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Trav5d-4Q5R1F6 114 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Myo7aP97479 2215 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Zfp867E9Q2M4 473 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Epha8O09127 1004 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Cd55bQ61476 407 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Scgb2b24Q7M747 112 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Smdt1Q9DB10 107 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Adam11Q9R1V4 773 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Sult2a4L7N245 285 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Fgfbp1O70514 251 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 P01808 119 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr1537P34983 314 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Cnr1P47746 473 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Btg2Q04211 158 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Rasl12Q08AT1 266 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr5Q60889 312 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr138Q7TRI7 312 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Olfr136Q8VG72 312 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Sval2Q99N75 144 aa13.72□□□□□ -0.21
Pcdha9-201ENSMUST00000115659 Rab33bO35963 229 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms