RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Edil3O35474 480 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gimap1P70224 277 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ear2P97425 156 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ldlrad2Q3V0V0 142 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Traf4Q61382 470 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm11541Q8C4D8 108 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Vash2Q8C5G2 355 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Shisa5Q9D7I0 235 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Rep15Q9D7T1 230 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fam189a1Q6A044 515 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slc16a12Q8BGC3 486 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Dlk2Q8K1E3 382 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Tm7sf3Q9CRG1 565 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Atg101Q9D8Z6 218 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Igkv5-45A0A0B4J1J1 115 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Zdhhc22A0PK84 263 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Onecut1O08755 465 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Nkx3-1P97436 237 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ndufb6Q3UIU2 128 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr10Q60883 311 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ewsr1Q61545 655 aaKnown RBP14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Pld4Q8BG07 503 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Xrcc3Q9CXE6 349 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 P01673 111 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr967Q7TRA6 310 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr480Q8VEZ0 312 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Q9DAN9 164 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fbxl6Q9QXW0 535 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Bex2Q9WTZ8 129 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Lyplal1Q3UFF7 239 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Lrrtm3Q8BZ81 582 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr922Q8VG50 311 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Cyhr1Q9QXA1 311 aa14.8□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Klk1b1P00755 261 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Klkb1P26262 638 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 MepeQ8K4L6 441 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr531Q8VGL2 304 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Parp4E9PYK3 1969 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Trav5-1A0A075B5Z7 114 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 GrprP21729 384 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Bcl2l15Q08ED0 167 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1454Q8VFW2 307 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1462Q8VFW3 307 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr829Q8VGX1 321 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm28557A0A087WQQ0 336 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm20918J3QN17 227 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm20877J3QPZ4 227 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Prr11Q8BHE0 368 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Lin28aQ8K3Y3 209 aaKnown RBP14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ppt2O35448 302 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 D17Wsu92eQ3TT38 291 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slco4c1Q8BGD4 722 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Prss42Q8VIF2 335 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr959Q9EQ86 311 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ackr1Q9QUI6 334 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Prrt2E9PUL5 346 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fcgr3P08508 261 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 FahP35505 419 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Mcpt8P43430 247 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 C1rlQ3UZ09 482 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1014Q7TR95 305 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1013Q7TR96 305 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 SheQ8BSD5 492 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slc10a6Q9CXB2 373 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Hoxa6P09092 232 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fgf8P37237 268 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Rpl30P62889 115 aaKnown RBP14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ctf2P83714 204 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 AhrrQ3U1U7 701 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Dnd1Q6VY05 352 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Pqlc2Q8C4N4 293 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr218E9PWV2 313 aa14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Exosc2Q8VBV3 293 aaKnown RBP14.79□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 1700025C18RikA2A580 89 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr902E9Q6Z7 309 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Slc25a33Q3TZX3 320 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gpank1Q61858 372 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1448Q8VFX1 314 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr750E9Q0Z1 331 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Prr12E9PYL2 2035 aaKnown RBP14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Trbv21A0A0A6YX06 97 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr1224-ps1A3KGY4 311 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 P01669 111 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ybx1P62960 322 aaKnown RBP14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Commd5Q8R395 224 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Igkv7-33P01632 114 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Zfp941Q3URY5 674 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr851Q7TRG0 312 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 BtlaQ7TSA3 306 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Olfr638Q8VH20 321 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Ccl27Q9Z1X0 120 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm15821A6X8J8 139 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Esp23A8R0V5 104 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r91E9PZR7 307 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Fabp9O08716 132 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Plp2Q9R1Q7 152 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Gm6569D3YTM9 175 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 Scrt2Q8BTH6 311 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 RhofQ8BYP3 211 aa14.78□□□□□ -0.04
Ccdc88a-201ENSMUST00000040182 YbeyQ8CAV0 164 aa14.78□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms