RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Scgb1b27Q91WB5 92 aa9.9□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Chchd2Q9D1L0 153 aa9.9□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Fam89bQ9QUI1 189 aa9.9□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ntn3Q9R1A3 580 aa9.9□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Cypt3B1AY64 174 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr872E9PVW2 323 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ighg2cF6TQW2 404 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 IfnabL7MTU6 190 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 P01864 335 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Hist1h1bP43276 223 aaKnown RBP9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Lclat1Q3UN02 376 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gp49aQ61450 303 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1000Q7TR99 314 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Vash2Q8C5G2 355 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Nectin4Q8R007 508 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Med25Q8VCB2 745 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr417F8VQB1 309 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Fut9O88819 359 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 P01798 113 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 H2-Ab1P01921 265 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 H3f3cP02301 136 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 P06344 263 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Mdga2P60755 949 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 H3f3aP84244 136 aaKnown RBP9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Bex6Q3TZW7 114 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Upk3bQ80YF6 275 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Plppr5Q8BJ52 321 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tmem56Q8CGF5 276 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Xcr1Q9R0M1 322 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 StrapQ9Z1Z2 350 aaKnown RBP9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Dock9Q8BIK4 2055 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Plxnd1Q3UH93 1925 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Obsl1D3YYU8 1804 aaKnown RBP9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr740E9PV79 311 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tex54G3UW99 86 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Fpr2O88536 351 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Zfand5O88878 213 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Cryba1P02525 198 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Tnfsf8P32972 239 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Arf1P84078 181 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Slc22a14Q497L9 629 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ceacam10Q61400 265 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Rnf170Q8CBG9 286 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Slc25a1Q8JZU2 311 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr960Q8VET5 316 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 D930007J09RikQ9D2K6 131 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gabrg1Q9R0Y8 465 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Kcnk3O35111 409 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Hist1h1aP43275 213 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Pax9P47242 342 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 CtseP70269 397 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 C1saQ8CG14 688 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Znf385aQ8VD12 386 aaKnown RBP9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1420Q8VF55 309 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1447Q8VFX3 309 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Slc31a2Q9CPU9 143 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1029A2ATE0 324 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 A630073D07RikE9PWS6 100 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr556E9Q549 324 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr204E9Q8M0 305 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Esp8F7AMQ8 149 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Rnf148G3X9R7 316 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 H2-LP01897 362 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gstp1P19157 210 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 PiglQ5SX19 252 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Wdr34Q5U4F6 535 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Cd200r4Q6XJV4 270 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1444Q8VFX2 319 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Abhd3Q91ZH7 411 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Bbc3Q99ML1 193 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Mapk7Q9WVS8 806 aa9.89□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Sptan1P16546 2472 aaKnown RBP9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm17677B3GLJ5 116 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm5239D3YYZ2 122 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Vmn1r129E9QA94 307 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm8720K9J7F4 307 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 GzmaP11032 260 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Csrp1P97315 193 aaKnown RBP9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr473Q8VG44 310 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Cela1Q91X79 266 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Rab4bQ91ZR1 213 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Ca15Q99N23 324 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Mrpl49Q9CQ40 166 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Nova1Q9JKN6 507 aaKnown RBP9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Pex14Q9R0A0 376 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Slc37a2Q9WU81 501 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Med12lQ8BQM9 2157 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr1039A2ARY0 319 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Il31Q6EAL8 163 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Osbpl11Q8CI95 751 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Syngr3Q8R191 229 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr186Q8VEX5 309 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Mgst3Q9CPU4 153 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 AcacaQ5SWU9 2345 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Olfr418A0A140T8J6 310 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Rbm24D3Z4I3 236 aaKnown RBP9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Gm3486L7N2D0 199 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Timm8bP62077 83 aaKnown RBP9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Msl2Q69ZF8 577 aa9.88□□□□□ -0.83
Topbp1-201ENSMUST00000035164 Vmn1r225Q8R2A5 298 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms