RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 CR1LQ2VPA4 569 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 WFDC8Q8IUA0 241 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 SPACA3Q8IXA5 215 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 EDARADDQ8WWZ3 215 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 CALYQ9NYX4 217 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 DSCAMO60469 2012 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 MARCH11A6NNE9 402 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 COLCA2A8K830 154 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 M0R1X1 148 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 FCGR3BO75015 233 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 RBMXL2O75526 392 aaKnown RBP14.06□□□□□ -0.16
PHGDH-229ENST00000641891 EIF3GO75821 320 aaKnown RBP eCLIP14.06□□□□□ -0.16
PHGDH-229ENST00000641891 CTRB1P17538 263 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 GATA4P43694 442 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 CEBPGP53567 150 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 ICAM4Q14773 271 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 ZNF726P1Q15940 193 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 CTRB2Q6GPI1 263 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 C1orf229Q6ZS94 237 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-229ENST00000641891 DTD1Q8TEA8 209 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 C14orf79Q96F83 325 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 WDR61Q9GZS3 305 aaKnown RBP14.06□□□□□ -0.16
PHGDH-229ENST00000641891 RNF7Q9UBF6 113 aa14.06□□□□□ -0.16
PHGDH-229ENST00000641891 A0A1W2PPE3 182 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 BTBD17A6NE02 478 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 F2RL2O00254 374 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 YPEL1O60688 119 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 OR9G9P0C7N8 305 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 SELENOVP59797 346 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 OR2B8PP59922 312 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 C17orf58Q2M2W7 97 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 GFRALQ6UXV0 394 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 DPPA3Q6W0C5 159 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 MRGPRGQ86SM5 289 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 CLDND2Q8NHS1 167 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 Q8TCH9 128 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 FAM222BQ8WU58 562 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 R3HDM4Q96D70 268 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 YPEL2Q96QA6 119 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 QTRT1Q9BXR0 403 aaKnown RBP14.05□□□□□ -0.16
PHGDH-229ENST00000641891 IFI27L2Q9H2X8 130 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 SEBOXQ9HB31 216 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-229ENST00000641891 SMCO4Q9NRQ5 59 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 SMG1Q96Q15 3661 aaKnown RBP14.05□□□□□ -0.16
PHGDH-229ENST00000641891 SCAF4O95104 1147 aaKnown RBP14.05□□□□□ -0.16
PHGDH-229ENST00000641891 ELLP55199 621 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-229ENST00000641891 SSX9Q7RTT3 188 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 TCTEX1D1Q8N7M0 179 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 RBMXL1Q96E39 390 aaKnown RBP14.05□□□□□ -0.16
PHGDH-229ENST00000641891 MLXQ9UH92 298 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 IL19Q9UHD0 177 aa14.05□□□□□ -0.16
PHGDH-229ENST00000641891 PUS1Q9Y606 427 aaKnown RBP eCLIP14.05□□□□□ -0.16
PHGDH-229ENST00000641891 GYPAP02724 150 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 CRYBA1P05813 215 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 SRP19P09132 144 aaKnown RBP14.04□□□□□ -0.16
PHGDH-229ENST00000641891 FGF8P55075 233 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-229ENST00000641891 TBR1Q16650 682 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 SOHLH1Q5JUK2 328 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 STUMQ69YW2 141 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 LCN15Q6UWW0 184 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 VKORC1L1Q8N0U8 176 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 TAF15Q92804 592 aaKnown RBP eCLIP14.04□□□□□ -0.16
PHGDH-229ENST00000641891 ISOC2Q96AB3 205 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 CCL13Q99616 98 aa14.04□□□□□ -0.16
PHGDH-229ENST00000641891 PSMG3Q9BT73 122 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-229ENST00000641891 DPRXA6NFQ7 191 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 PMS2P5A8MQ11 134 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 C16orf97H3BN30 126 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 ATXN7O15265 892 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-229ENST00000641891 CGB3P0DN86 165 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 CGB7P0DN87 165 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 FLI1Q01543 452 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-229ENST00000641891 ZNF506Q5JVG8 444 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 TCF23Q7RTU1 214 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 ZCCHC24Q8N2G6 241 aaKnown RBP14.03□□□□□ -0.16
PHGDH-229ENST00000641891 ZNF561Q8N587 486 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 FAM216BQ8N7L0 139 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 GAFA1Q96PS6 74 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 SCNM1Q9BWG6 230 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 OR6C3Q9NZP0 311 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 ICE1Q9Y2F5 2266 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 CEBPZOSA8MTT3 80 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 HBE1P02100 147 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 THBDP07204 575 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 OR8U8P0C7N1 319 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 CCL8P80075 99 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 TMEM108Q6UXF1 575 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 SNRNP40Q96DI7 357 aaKnown RBP14.03□□□□□ -0.16
PHGDH-229ENST00000641891 RCC1LQ96I51 464 aaKnown RBP14.03□□□□□ -0.16
PHGDH-229ENST00000641891 GNG13Q9P2W3 67 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 LAMP3Q9UQV4 416 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 SPTBN2O15020 2390 aa14.03□□□□□ -0.16
PHGDH-229ENST00000641891 RP1L1Q8IWN7 2480 aaPredicted RBP14.02□□□□□ -0.16
PHGDH-229ENST00000641891 ZFP82Q8N141 532 aa14.02□□□□□ -0.16
PHGDH-229ENST00000641891 CYB561D1Q8N8Q1 229 aa14.02□□□□□ -0.16
PHGDH-229ENST00000641891 NUP37Q8NFH4 326 aa14.02□□□□□ -0.16
PHGDH-229ENST00000641891 SDSLQ96GA7 329 aa14.02□□□□□ -0.16
PHGDH-229ENST00000641891 ZNF665Q9H7R5 613 aa14.02□□□□□ -0.16
PHGDH-229ENST00000641891 BSPH1Q075Z2 132 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms