RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	NPB	Q8NG41	125 aa		12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	OR5H2	Q8NGV7	314 aa		12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	GPX8	Q8TED1	209 aa		12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	C15orf40	Q8WUR7	153 aa		12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	FLYWCH2	Q96CP2	140 aa	Known RBP	12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	RITA1	Q96K30	269 aa		12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	TSNAX	Q99598	290 aa	Known RBP	12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	ZNF107	Q9UII5	783 aa	Predicted RBP	12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	ANAPC10	Q9UM13	185 aa		12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	CEPT1	Q9Y6K0	416 aa		12.53	□□□□□ -0.4
SPIN3-233	ENST00000640039	IGKV1D-13	A0A0B4J2D9	117 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	RRH	O14718	337 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	NDUFA3	O95167	84 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	PPY	P01298	95 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	IGKV1-16	P04430	117 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	CSF1	P09603	554 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	IGKV1-13	P0DP09	117 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	RRAS	P10301	218 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	AADAC	P22760	399 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	LINC00205	P59089	165 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	HERV-K104	P61576	105 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	LIN54	Q6MZP7	749 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	LAX1	Q8IWV1	398 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	STPG2	Q8N412	459 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	WIPF2	Q8TF74	440 aa	Predicted RBP	12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	SECTM1	Q8WVN6	248 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	C5orf30	Q96GV9	206 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	NOL4L	Q96MY1	436 aa	Predicted RBP	12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	GON7	Q9BXV9	100 aa		12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	RBMX2	Q9Y388	322 aa	Known RBP	12.52	□□□□□ -0.41
SPIN3-233	ENST00000640039	CTDSP2	O14595	271 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	TPPP	O94811	219 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	SPDEF	O95238	335 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	HLA-DRB1	P01911	266 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	PMP2	P02689	132 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	OPN1MW	P04001	364 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	OPN1MW2	P0DN77	364 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	OPN1MW3	P0DN78	364 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	NAT1	P18440	290 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	DUT	P33316	252 aa	Known RBP	12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	RCVRN	P35243	200 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	FXYD4	P59646	89 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	NSUN5P1	Q3KNT7	163 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	KHDC1L	Q5JSQ8	128 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	KCTD9	Q7L273	389 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	NDUFA11	Q86Y39	141 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	BVES	Q8NE79	360 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	GIMAP1	Q8WWP7	306 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	HARBI1	Q96MB7	349 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	CITED2	Q99967	270 aa	Predicted RBP	12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	HSPB9	Q9BQS6	159 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	FBXL15	Q9H469	300 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	LINC00527	Q9UJ94	153 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	PRELID3B	Q9Y3B1	194 aa		12.51	□□□□□ -0.41
SPIN3-233	ENST00000640039	TRRAP	Q9Y4A5	3859 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	TCRBV4S1A1T	A0A5B7	111 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	SHOX	O15266	292 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	VDAC1	P21796	283 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	HLA-DMA	P28067	261 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	HRH1	P35367	487 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	RFX2	P48378	723 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	RNASE12	Q5GAN4	147 aa	Known RBP	12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	HIST2H2BD	Q6DRA6	164 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	TREML4	Q6UXN2	200 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	OVCH2	Q7RTZ1	564 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	ZNF329	Q86UD4	541 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	HSD17B10	Q99714	261 aa	Known RBP	12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	SLC5A7	Q9GZV3	580 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	MIXL1	Q9H2W2	232 aa		12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	METTL1	Q9UBP6	276 aa	Known RBP	12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	RSL24D1	Q9UHA3	163 aa	Known RBP	12.5	□□□□□ -0.41
SPIN3-233	ENST00000640039	LINC01548	A6NM66	108 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	LGALS7	P47929	136 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	TSPAN5	P62079	268 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	CD83	Q01151	205 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	DYRK1A	Q13627	763 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	PSG5	Q15238	335 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	MSMO1	Q15800	293 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	C10orf99	Q6UWK7	81 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	TMEM17	Q86X19	198 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	COMMD1	Q8N668	190 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	MCFD2	Q8NI22	146 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	ABHD5	Q8WTS1	349 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	TCTEX1D2	Q8WW35	142 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	BORCS5	Q969J3	196 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	DIRAS2	Q96HU8	199 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	ZNF2	Q9BSG1	426 aa	Predicted RBP	12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	DCUN1D5	Q9BTE7	237 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	SLIRP	Q9GZT3	109 aa	Known RBP	12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	MMP27	Q9H306	513 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	OR51J1	Q9H342	316 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	PARP11	Q9NR21	331 aa		12.49	□□□□□ -0.41
SPIN3-233	ENST00000640039	IGHV7-81	A0A0B4J1V7	117 aa		12.48	□□□□□ -0.41
SPIN3-233	ENST00000640039		A0A1W2PRX2	142 aa		12.48	□□□□□ -0.41
SPIN3-233	ENST00000640039	LINC00473	A8K010	186 aa		12.48	□□□□□ -0.41
SPIN3-233	ENST00000640039	SLC25A17	O43808	307 aa		12.48	□□□□□ -0.41
SPIN3-233	ENST00000640039	CRYZL1	O95825	349 aa		12.48	□□□□□ -0.41
SPIN3-233	ENST00000640039	TSPAN15	O95858	294 aa		12.48	□□□□□ -0.41
SPIN3-233	ENST00000640039	TMEM177	Q53S58	311 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms