RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 OR5AP2Q8NGF4 316 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 GPX8Q8TED1 209 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 GPHA2Q96T91 129 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 IFT46Q9NQC8 304 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 SLC35D1Q9NTN3 355 aa17.15■□□□□ 0.34
SCN1B-206ENST00000638536 SMIM31A0A1B0GVY4 71 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 PSMB11A5LHX3 300 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 FCN1O00602 326 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 OR5H8P0DN80 308 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 RFX2P48378 723 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 ZNF645Q8N7E2 425 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 DDB2Q92466 427 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 BCL7BQ9BQE9 202 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 NECAP2Q9NVZ3 263 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 IGHV7-81A0A0B4J1V7 117 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 RRHO14718 337 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 NAT1P18440 290 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 RPL30P62888 115 aaKnown RBP17.14■□□□□ 0.33
SCN1B-206ENST00000638536 LAX1Q8IWV1 398 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 BVESQ8NE79 360 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 FAM110DQ8TAY7 271 aaPredicted RBP17.14■□□□□ 0.33
SCN1B-206ENST00000638536 TPSG1Q9NRR2 321 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 EXTL2Q9UBQ6 330 aa17.14■□□□□ 0.33
SCN1B-206ENST00000638536 A0A1W2PRX2 142 aa17.13■□□□□ 0.33
SCN1B-206ENST00000638536 PMP2P02689 132 aa17.13■□□□□ 0.33
SCN1B-206ENST00000638536 CSF1P09603 554 aa17.13■□□□□ 0.33
SCN1B-206ENST00000638536 RPS16P62249 146 aaKnown RBP17.13■□□□□ 0.33
SCN1B-206ENST00000638536 NDPQ00604 133 aa17.13■□□□□ 0.33
SCN1B-206ENST00000638536 LIN54Q6MZP7 749 aa17.13■□□□□ 0.33
SCN1B-206ENST00000638536 PDPNQ86YL7 162 aa17.13■□□□□ 0.33
SCN1B-206ENST00000638536 FOXRED2Q8IWF2 684 aa17.13■□□□□ 0.33
SCN1B-206ENST00000638536 KIAA1456Q9P272 454 aa17.13■□□□□ 0.33
SCN1B-206ENST00000638536 SRRM4A7MD48 611 aaKnown RBP17.12■□□□□ 0.33
SCN1B-206ENST00000638536 AP4M1O00189 453 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 IGLV2-23P01705 113 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 HLA-DRB1P01911 266 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 APOA2P02652 100 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 EIF4EBP1Q13541 118 aaPredicted RBP17.12■□□□□ 0.33
SCN1B-206ENST00000638536 CDK10Q15131 360 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 PSG5Q15238 335 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 C2orf68Q2NKX9 166 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 RNASE12Q5GAN4 147 aaKnown RBP17.12■□□□□ 0.33
SCN1B-206ENST00000638536 CHPT1Q8WUD6 406 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 FLYWCH2Q96CP2 140 aaKnown RBP17.12■□□□□ 0.33
SCN1B-206ENST00000638536 ABHD1Q96SE0 405 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 CCL28Q9NRJ3 127 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 RBMX2Q9Y388 322 aaKnown RBP17.12■□□□□ 0.33
SCN1B-206ENST00000638536 FBXO7Q9Y3I1 522 aa17.12■□□□□ 0.33
SCN1B-206ENST00000638536 RBBP9O75884 186 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 PPYP01298 95 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 HLA-DMAP28067 261 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 THBS3P49746 956 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 ZNF660Q6AZW8 331 aaPredicted RBP17.11■□□□□ 0.33
SCN1B-206ENST00000638536 LCNL1Q6ZST4 164 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 OVCH2Q7RTZ1 564 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 NDUFA11Q86Y39 141 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 SECTM1Q8WVN6 248 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 CLCC1Q96S66 551 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 SLIRPQ9GZT3 109 aaKnown RBP17.11■□□□□ 0.33
SCN1B-206ENST00000638536 RBM38Q9H0Z9 239 aaKnown RBP17.11■□□□□ 0.33
SCN1B-206ENST00000638536 EHFQ9NZC4 300 aa17.11■□□□□ 0.33
SCN1B-206ENST00000638536 CCDC59Q9P031 241 aaKnown RBP17.11■□□□□ 0.33
SCN1B-206ENST00000638536 TCRBV4S1A1TA0A5B7 111 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 ATP6V0E1O15342 81 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 RGS5O15539 181 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 KCNAB3O43448 404 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 FXYD4P59646 89 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 GIMAP1Q8WWP7 306 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 RNF5Q99942 180 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 METTL1Q9UBP6 276 aaKnown RBP17.1■□□□□ 0.33
SCN1B-206ENST00000638536 ADAM30Q9UKF2 790 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 G3V318 75 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 SLC25A17O43808 307 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 IGF1P05019 195 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 BRWD1-AS2P59051 145 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 CFHR3Q02985 330 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 OR2B11Q5JQS5 317 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 C18orf65Q6ZTR6 163 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 OR4X2Q8NGF9 303 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 MMP27Q9H306 513 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 OR51J1Q9H342 316 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 KLK11Q9UBX7 282 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 WSB1Q9Y6I7 421 aa17.1■□□□□ 0.33
SCN1B-206ENST00000638536 TNFSF12O43508 249 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 HRH1P35367 487 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 CX3CL1P78423 397 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 DYRK1AQ13627 763 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 PLGLAQ15195 96 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 TMEM177Q53S58 311 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 DHRS11Q6UWP2 260 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 SCPEP1Q9HB40 452 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 PARP11Q9NR21 331 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 TAS2R8Q9NYW2 309 aa17.09■□□□□ 0.33
SCN1B-206ENST00000638536 NOL3O60936 208 aaKnown RBP17.08■□□□□ 0.32
SCN1B-206ENST00000638536 CRYZL1O95825 349 aa17.08■□□□□ 0.32
SCN1B-206ENST00000638536 EGR2P11161 476 aaPredicted RBP17.08■□□□□ 0.32
SCN1B-206ENST00000638536 PJVKQ0ZLH3 352 aa17.08■□□□□ 0.32
SCN1B-206ENST00000638536 OR5H2Q8NGV7 314 aa17.08■□□□□ 0.32
SCN1B-206ENST00000638536 OR52I2Q8NH67 350 aa17.08■□□□□ 0.32
SCN1B-206ENST00000638536 HARBI1Q96MB7 349 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms