RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 I3L521 148 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 MFNGO00587 321 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 SCGNO76038 276 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 GSTT2P0CG29 244 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 GSTT2BP0CG30 244 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 FGF9P31371 208 aaPredicted RBP14.76□□□□□ -0.05
CLN6-221ENST00000637494 LUMP51884 338 aaPredicted RBP14.76□□□□□ -0.05
CLN6-221ENST00000637494 FHL3Q13643 280 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 ACTBL2Q562R1 376 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 IGSF11Q5DX21 431 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 UNQ5815/PRO19632Q6UWF5 114 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 TPRA1Q86W33 373 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 ZNF383Q8NA42 475 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 GNB4Q9HAV0 340 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 STUB1Q9UNE7 303 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 GAB2Q9UQC2 676 aa14.76□□□□□ -0.05
CLN6-221ENST00000637494 NOTOA8MTQ0 251 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 RAB27BO00194 218 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 FCN1O00602 326 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 CA2P00918 260 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 LGALS7P47929 136 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 NDPQ00604 133 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 SRSF7Q16629 238 aaKnown RBP eCLIP14.75□□□□□ -0.05
CLN6-221ENST00000637494 ZNF260Q3ZCT1 412 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 AKIRIN2Q53H80 203 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 TXNL4BQ9NX01 149 aaKnown RBP14.75□□□□□ -0.05
CLN6-221ENST00000637494 NUBP2Q9Y5Y2 271 aa14.75□□□□□ -0.05
CLN6-221ENST00000637494 A0A0B4J203 849 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 PROP1O75360 226 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 CNIH1O95406 144 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 IGKV1-16P04430 117 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 RRASP10301 218 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 INSL3P51460 131 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 RTL8BQ17RB0 113 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 MAFIPQ8WZ33 124 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 ARPC1AQ92747 370 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 SLA2Q9H6Q3 261 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 ZNF230Q9UIE0 474 aaPredicted RBP14.74□□□□□ -0.05
CLN6-221ENST00000637494 FBXO7Q9Y3I1 522 aa14.74□□□□□ -0.05
CLN6-221ENST00000637494 SMIM30A4D0T7 59 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 SLC25A17O43808 307 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 DTYMKP23919 212 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 ECI1P42126 302 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 GNB1P62873 340 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 KIAA0141Q14154 515 aaPredicted RBP14.73□□□□□ -0.05
CLN6-221ENST00000637494 FXYD3Q14802 87 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 CDNFQ49AH0 187 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 LFNGQ8NES3 379 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 ADTRPQ96IZ2 230 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 HARBI1Q96MB7 349 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 B9D2Q9BPU9 175 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 FAM103A1Q9BTL3 118 aaKnown RBP14.73□□□□□ -0.05
CLN6-221ENST00000637494 SDHAF2Q9NX18 166 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 DAPK2Q9UIK4 370 aa14.73□□□□□ -0.05
CLN6-221ENST00000637494 LINC01619G3V211 115 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 OVOL1O14753 267 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 SHOXO15266 292 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 LGALS1P09382 135 aaKnown RBP14.72□□□□□ -0.05
CLN6-221ENST00000637494 CTXN2P0C2S0 81 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 LINC00205P59089 165 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 TPPP2P59282 170 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 PITPNAQ00169 270 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 C19orf54Q5BKX5 351 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 VAX1Q5SQQ9 334 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 ZNF773Q6PK81 442 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 Q6ZS49 121 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 GRPEL2Q8TAA5 225 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 ZNF355PQ9NSJ1 428 aa14.72□□□□□ -0.05
CLN6-221ENST00000637494 RRP15Q9Y3B9 282 aaKnown RBP14.72□□□□□ -0.05
CLN6-221ENST00000637494 SOX15O60248 233 aa14.71□□□□□ -0.05
CLN6-221ENST00000637494 EGR2P11161 476 aaPredicted RBP14.71□□□□□ -0.05
CLN6-221ENST00000637494 ZNF429Q86V71 674 aa14.71□□□□□ -0.05
CLN6-221ENST00000637494 NR2C2APQ86WQ0 139 aa14.71□□□□□ -0.05
CLN6-221ENST00000637494 BVESQ8NE79 360 aa14.71□□□□□ -0.05
CLN6-221ENST00000637494 MS4A10Q96PG2 267 aa14.71□□□□□ -0.05
CLN6-221ENST00000637494 ST6GALNAC5Q9BVH7 336 aa14.71□□□□□ -0.05
CLN6-221ENST00000637494 DCSTAMPQ9H295 470 aa14.71□□□□□ -0.05
CLN6-221ENST00000637494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.71□□□□□ -0.05
CLN6-221ENST00000637494 ARPC1BO15143 372 aaKnown RBP14.7□□□□□ -0.06
CLN6-221ENST00000637494 LY86O95711 162 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 TRGV3P03979 118 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 GNG2P59768 71 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 VMA21Q3ZAQ7 101 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 HACD4Q5VWC8 232 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 SFXN4Q6P4A7 337 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 H1FOOQ8IZA3 346 aaPredicted RBP14.7□□□□□ -0.06
CLN6-221ENST00000637494 CASTOR1Q8WTX7 329 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 DCUN1D4Q92564 292 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 TMEM68Q96MH6 324 aa14.7□□□□□ -0.06
CLN6-221ENST00000637494 H3BUA1 57 aa14.69□□□□□ -0.06
CLN6-221ENST00000637494 SAP30O75446 220 aa14.69□□□□□ -0.06
CLN6-221ENST00000637494 SLC22A5O76082 557 aa14.69□□□□□ -0.06
CLN6-221ENST00000637494 TMEM177Q53S58 311 aa14.69□□□□□ -0.06
CLN6-221ENST00000637494 PRR25Q96S07 402 aa14.69□□□□□ -0.06
CLN6-221ENST00000637494 ALX4Q9H161 411 aaPredicted RBP14.69□□□□□ -0.06
CLN6-221ENST00000637494 TPSG1Q9NRR2 321 aa14.69□□□□□ -0.06
CLN6-221ENST00000637494 SCOCQ9UIL1 159 aa14.69□□□□□ -0.06
CLN6-221ENST00000637494 ZNF256Q9Y2P7 627 aaPredicted RBP14.69□□□□□ -0.06
CLN6-221ENST00000637494 A0A0G2JLM5 398 aa14.68□□□□□ -0.06
CLN6-221ENST00000637494 C13orf42A0A1B0GVH6 325 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms