RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 KPTNQ9Y664 436 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 TACC2O95359 2948 aa12.55□□□□□ -0.4
CLN6-219ENST00000637329 FBN3Q75N90 2809 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 IGHV2-26A0A0B4J1V2 119 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 LINC00473A8K010 186 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 SLC25A16P16260 332 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 ZNF16P17020 682 aaPredicted RBP12.54□□□□□ -0.4
CLN6-219ENST00000637329 RPL30P62888 115 aaKnown RBP12.54□□□□□ -0.4
CLN6-219ENST00000637329 TAGLNQ01995 201 aaKnown RBP12.54□□□□□ -0.4
CLN6-219ENST00000637329 IL15RAQ13261 267 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 ZNF585BQ52M93 769 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 RPL39P5Q59GN2 51 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 UTF1Q5T230 341 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 SPAG16Q8N0X2 631 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 ABHD12Q8N2K0 398 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 ZBTB8BQ8NAP8 495 aaPredicted RBP12.54□□□□□ -0.4
CLN6-219ENST00000637329 OR10X1Q8NGY0 326 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 TMEM186Q96B77 213 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 OR10C1Q96KK4 312 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 ZNF251Q9BRH9 671 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 CLEC7AQ9BXN2 247 aa12.54□□□□□ -0.4
CLN6-219ENST00000637329 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
CLN6-219ENST00000637329 AMMECR1Q9Y4X0 333 aaPredicted RBP12.54□□□□□ -0.4
CLN6-219ENST00000637329 MTORP42345 2549 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 IGHV2-70DA0A0C4DH43 119 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 HMSDA8MTL9 139 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 MPTX1A8MV57 137 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 PROP1O75360 226 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 IGHV3-7P01780 117 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 SLC25A4P12235 298 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 PSMB6P28072 239 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 PRRX1P54821 245 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 PAX2Q02962 417 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
CLN6-219ENST00000637329 OR13D1Q8NGV5 346 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 OR4S2Q8NH73 311 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 DDB2Q92466 427 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 PLEKHA2Q9HB19 425 aa12.53□□□□□ -0.4
CLN6-219ENST00000637329 TRAV14DV4A0A0A6YYC5 116 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 A0A1B0GU03 582 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 A0A1W2PPE3 182 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 TOR1AO14656 332 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 TXNL1O43396 289 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 MPC2O95563 127 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 IGKV1-39P01597 117 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 IGLV1-47P01700 117 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 IGKV1D-39P04432 117 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 AKR1C2P52895 323 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 NKX2-5P52952 324 aaPredicted RBP12.52□□□□□ -0.41
CLN6-219ENST00000637329 HLA-DRB5Q30154 266 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 DHRS7BQ6IAN0 325 aaPredicted RBP12.52□□□□□ -0.41
CLN6-219ENST00000637329 C11orf87Q6NUJ2 197 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 Q8N7P7 452 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 OR11H4Q8NGC9 324 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 RNASE11Q8TAA1 199 aaKnown RBP12.52□□□□□ -0.41
CLN6-219ENST00000637329 NRGNQ92686 78 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 MBD6Q96DN6 1003 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 RRNAD1Q96FB5 475 aaKnown RBP12.52□□□□□ -0.41
CLN6-219ENST00000637329 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
CLN6-219ENST00000637329 PCGF1Q9BSM1 259 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 USF3Q68DE3 2245 aa12.52□□□□□ -0.41
CLN6-219ENST00000637329 IGHV4-30-2A0A087WSY4 118 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 RAMP3O60896 148 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 HPRT1P00492 218 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 RRASP10301 218 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 LYL1P12980 280 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 PRTN3P24158 256 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 ZFP36P26651 326 aaKnown RBP12.51□□□□□ -0.41
CLN6-219ENST00000637329 LPAR6P43657 344 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 ARHGDIBP52566 201 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 Q5BKY6 102 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 NCR3LG1Q68D85 454 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 TMEM65Q6PI78 240 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 OR11H6Q8NGC7 330 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 OR4D5Q8NGN0 318 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 THAP6Q8TBB0 222 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 ST6GALNAC6Q969X2 333 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 HEXA-AS1Q9H8Q6 139 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 COA4Q9NYJ1 87 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 MMP24Q9Y5R2 645 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
CLN6-219ENST00000637329 FXYD6-FXYD2A0A087WZ82 144 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 IGHV4-61A0A0C4DH41 118 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 FAM90A9PA6NNJ1 464 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 S1PR2O95136 353 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 APOA2P02652 100 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 P0C879 139 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 C4BPBP20851 252 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 BRWD1-AS2P59051 145 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 LCN2P80188 198 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 SMCO1Q147U7 214 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 RTL8BQ17RB0 113 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 CLEC12BQ2HXU8 276 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 LRRC37A5PQ49AS3 106 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 SIRPDQ9H106 197 aa12.5□□□□□ -0.41
CLN6-219ENST00000637329 GSKIPQ9P0R6 139 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms