RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 SPNS3Q6ZMD2 512 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 LIAT1Q6ZQX7 453 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 TGIF2LXQ8IUE1 241 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 LGI3Q8N145 548 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 OR8H3Q8N146 312 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 C12orf45Q8N5I9 185 aaPredicted RBP10.85□□□□□ -0.67
LINC00643-207ENST00000637212 OR5AN1Q8NGI8 311 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 GLYATL2Q8WU03 294 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 TCTEX1D2Q8WW35 142 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 DDB2Q92466 427 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 IL22RA2Q969J5 263 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 RPEQ96AT9 228 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 TMEM56Q96MV1 263 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 TP53RKQ96S44 253 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 TMEM56-RWDD3S4R434 201 aa10.85□□□□□ -0.67
LINC00643-207ENST00000637212 LINC00473A8K010 186 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 CD5LO43866 347 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 ATG12O94817 140 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 CDS2O95674 445 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 OR5AC1P0C628 307 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 CBX3Q13185 183 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 SP6Q3SY56 376 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 ZNF383Q8NA42 475 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 OR52B4Q8NGK2 314 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 OR51H1Q8NH63 302 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 CASTOR1Q8WTX7 329 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 C18orf12Q96KH6 178 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 GPHA2Q96T91 129 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 NABP2Q9BQ15 211 aa10.84□□□□□ -0.67
LINC00643-207ENST00000637212 F8P00451 2351 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 A0A1B0GVG6 124 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 HMX3A6NHT5 357 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 SSNA1O43805 119 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 AVPP01185 164 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 FOSL1P15407 271 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 ZNF16P17020 682 aaPredicted RBP10.83□□□□□ -0.68
LINC00643-207ENST00000637212 HLA-GP17693 338 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 BRWD1-AS2P59051 145 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 ANKRD55Q3KP44 614 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 ZNF585BQ52M93 769 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 LDLRAD2Q5SZI1 272 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 DHRS7BQ6IAN0 325 aaPredicted RBP10.83□□□□□ -0.68
LINC00643-207ENST00000637212 PDZD9Q8IXQ8 264 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 SPAG16Q8N0X2 631 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 DRAXINQ8NBI3 349 aaPredicted RBP10.83□□□□□ -0.68
LINC00643-207ENST00000637212 NANPQ8TBE9 248 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 CHAC2Q8WUX2 184 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 AJUBAQ96IF1 538 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 AIFM2Q9BRQ8 373 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 MRPL20Q9BYC9 149 aaKnown RBP10.83□□□□□ -0.68
LINC00643-207ENST00000637212 MED28Q9H204 178 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 PLEKHA2Q9HB19 425 aa10.83□□□□□ -0.68
LINC00643-207ENST00000637212 CELSR1Q9NYQ6 3014 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 DSCAML1Q8TD84 2053 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 IGHV1-3A0A0C4DH29 117 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 DUXBA0A1W2PPF3 345 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 A0A1W2PRD5 423 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 A0A1W2PRF3 423 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 A0A1W2PRM7 423 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 DBX1A6NMT0 343 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 H0YJW9 148 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 HPRT1P00492 218 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 APOA2P02652 100 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 TRAPPC2P0DI81 140 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 TRAPPC2BP0DI82 140 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 CD1BP29016 333 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 LPAR6P43657 344 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 ARHGDIBP52566 201 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 DIAPH2-AS1Q14236 149 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 RTL8BQ17RB0 113 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 KLF17Q5JT82 389 aaPredicted RBP10.82□□□□□ -0.68
LINC00643-207ENST00000637212 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 PDPNQ86YL7 162 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 ZNF695Q8IW36 515 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 SELENOHQ8IZQ5 122 aaKnown RBP10.82□□□□□ -0.68
LINC00643-207ENST00000637212 CADM3Q8N126 398 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 OR4S2Q8NH73 311 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 RNF5Q99942 180 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 MEGF9Q9H1U4 602 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 RAB18Q9NP72 206 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 NUP50Q9UKX7 468 aa10.82□□□□□ -0.68
LINC00643-207ENST00000637212 CSMD2Q7Z408 3487 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 C2CD3Q4AC94 2353 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 FCGR3BO75015 233 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 FSHBP01225 129 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 IGHV4-38-2P0DP08 117 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 SAA4P35542 130 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 REG1BP48304 166 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 RAB13P51153 203 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 BCAP31P51572 246 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 LINC00205P59089 165 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 RRAS2P62070 204 aaPredicted RBP10.81□□□□□ -0.68
LINC00643-207ENST00000637212 HABP2Q14520 560 aaPredicted RBP10.81□□□□□ -0.68
LINC00643-207ENST00000637212 MOB3BQ86TA1 216 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 THNSL2Q86YJ6 484 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 UXS1Q8NBZ7 420 aa10.81□□□□□ -0.68
LINC00643-207ENST00000637212 RBPMSQ93062 196 aaKnown RBP10.81□□□□□ -0.68
LINC00643-207ENST00000637212 SLC35D1Q9NTN3 355 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms