RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ESDP10768 282 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 NPCDR1Q9BY65 106 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 CHODLQ9H9P2 273 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 HSPB7Q9UBY9 170 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 PAM16Q9Y3D7 125 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 CD82P27701 267 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 CDC34P49427 236 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 CARD18P57730 90 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 BATFQ16520 125 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 DMRTA1Q5VZB9 504 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 MRPL21Q7Z2W9 205 aaKnown RBP13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 OR5P3Q8WZ94 311 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 KCNIP2Q9NS61 270 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 RARRES3Q9UL19 164 aa13.15□□□□□ -0.3
CACNA1A-235ENST00000637004 ZNF716A6NP11 495 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 CBR3O75828 277 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 SYNGR4O95473 234 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 GNB1P62873 340 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 TCF15Q12870 199 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 PRSS33Q8NF86 280 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 OR5A2Q8NGI9 324 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 SGCZQ96LD1 299 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 PI4KAP42356 2102 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 SPTBN4Q9H254 2564 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 FREM2Q5SZK8 3169 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 TRAV24A0A0B4J272 114 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 WDR1O75083 606 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 KITLGP21583 273 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 MOB1BQ7L9L4 216 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 OR5AU1Q8NGC0 362 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 HSPB9Q9BQS6 159 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
CACNA1A-235ENST00000637004 GRIFINA4D1Z8 144 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 G3V3Y1 287 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 SYNGR1O43759 233 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 NDUFB4O95168 129 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 C1QTNF9P0C862 333 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 CRISP2P16562 243 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 SELEP16581 610 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 EPHA8P29322 1005 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 TMEM249Q2WGJ8 235 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 TDRG1Q3Y452 100 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 GMPPAQ96IJ6 420 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 AURKAIP1Q9NWT8 199 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 TRAV9-1A0A075B6T8 112 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 PATE3B3GLJ2 98 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 CYC1P08574 325 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 TDGF1P13385 188 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 CD33P20138 364 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 TCF23Q7RTU1 214 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 PROK2Q9HC23 129 aa13.13□□□□□ -0.31
CACNA1A-235ENST00000637004 A0A1W2PR80 420 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 PLA2G5P39877 138 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 VN1R17PQ8TDU5 208 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 TXNDC17Q9BRA2 123 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 DLL3Q9NYJ7 618 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 A8MXE2 369 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 CRYAAP02489 173 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 TFF3Q07654 80 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 MYPOPQ86VE0 399 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 FAM58AQ8N1B3 248 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 KCNE4Q8WWG9 221 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 CIB3Q96Q77 187 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 SIAH2O43255 324 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 EGR1P18146 543 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 CCNOP22674 350 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 VWC2Q2TAL6 325 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 NRN1LQ496H8 165 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 ETFRF1Q6IPR1 90 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 AGBL5Q8NDL9 886 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 IFI44Q8TCB0 444 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 SAMD10Q9BYL1 202 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 WIPI2Q9Y4P8 454 aa13.12□□□□□ -0.31
CACNA1A-235ENST00000637004 PMS2P5A8MQ11 134 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 SERF1AO75920 110 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 RAB7AP51149 207 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 SSR4P51571 173 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 RBX1P62877 108 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 PCOLCEQ15113 449 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 LRP11Q86VZ4 500 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 DRAM1Q8N682 238 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 CADM4Q8NFZ8 388 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 OR10G8Q8NGN5 311 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 RAB1CQ92928 201 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 CLN8Q9UBY8 286 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 TP53TG3Q9ULZ0 132 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 ATP5G3P48201 142 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 LHX2P50458 406 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 UBE2G2P60604 165 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 TRA2AQ13595 282 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 BAGE3Q86Y29 109 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 BAGE2Q86Y30 109 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 SLC25A45Q8N413 288 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 OR1L1Q8NH94 360 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 CRIM1Q9NZV1 1036 aa13.11□□□□□ -0.31
CACNA1A-235ENST00000637004 LRRC30A6NM36 301 aa13.1□□□□□ -0.31
CACNA1A-235ENST00000637004 RBFOX2O43251 390 aaKnown RBP eCLIP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms