RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 C9orf152Q5JTZ5 239 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 DHRS11Q6UWP2 260 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 LYSMD2Q8IV50 215 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 DIRAS2Q96HU8 199 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 ABHD1Q96SE0 405 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 SLC35D1Q9NTN3 355 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 NDUFA13Q9P0J0 144 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 KIAA1456Q9P272 454 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 J3QRK9 145 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 KCNAB3O43448 404 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 SPDEFO95238 335 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 IGLV2-14P01704 120 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 IGKV1-16P04430 117 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 DUTP33316 252 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 HRH1P35367 487 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 RFX2P48378 723 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 LINC00205P59089 165 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 SRSF4Q08170 494 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 RTL8BQ17RB0 113 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 ACTBL2Q562R1 376 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 ZNF660Q6AZW8 331 aaPredicted RBP11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 PYHIN1Q6K0P9 492 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 SLC35E3Q7Z769 313 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 FOXRED2Q8IWF2 684 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 SGMS2Q8NHU3 365 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 FCAMRQ8WWV6 532 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 DDB2Q92466 427 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 BORCS5Q969J3 196 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 FLYWCH2Q96CP2 140 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 RBMXL1Q96E39 390 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 RITA1Q96K30 269 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 HSD17B10Q99714 261 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 DCUN1D5Q9BTE7 237 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 MMP27Q9H306 513 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 MTFP1Q9UDX5 166 aa11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 RBMX2Q9Y388 322 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-209ENST00000634889 GABARAPH6UMI1 98 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 RRHO14718 337 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 CTDSPLO15194 276 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 HLA-DRB1P01911 266 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 PMP2P02689 132 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 TBPP20226 339 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 CNTFRP26992 372 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 HLA-DMAP28067 261 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 HERV-K104P61576 105 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 SSBP1Q04837 148 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 C5orf64Q2M2E5 130 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 ZBTB34Q8NCN2 500 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 OR52I2Q8NH67 350 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 CHPT1Q8WUD6 406 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 SECTM1Q8WVN6 248 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 DGCR14Q96DF8 476 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 TSNAXQ99598 290 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 KLK11Q9UBX7 282 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 PRELID3BQ9Y3B1 194 aa11.67□□□□□ -0.54
CDC42BPB-209ENST00000634889 LINC00473A8K010 186 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 AP4M1O00189 453 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 FBXO24O75426 580 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 TNFSF8P32971 234 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 LGALS7P47929 136 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 EIF4EBP1Q13541 118 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 IL18Q14116 193 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 VAX1Q5SQQ9 334 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 LIN54Q6MZP7 749 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 ZNF66Q6ZN08 573 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 KCTD9Q7L273 389 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 CENPVQ7Z7K6 275 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 OR6F1Q8NGZ6 308 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 SMIM4Q8WVI0 70 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 MOB3AQ96BX8 217 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 ZNF2Q9BSG1 426 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 GON7Q9BXV9 100 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 SLC5A7Q9GZV3 580 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 ZNF107Q9UII5 783 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 ZNF580Q9UK33 172 aa11.66□□□□□ -0.54
CDC42BPB-209ENST00000634889 FXYD4P59646 89 aa11.65□□□□□ -0.54
CDC42BPB-209ENST00000634889 RPS16P62249 146 aaKnown RBP11.65□□□□□ -0.54
CDC42BPB-209ENST00000634889 PSG5Q15238 335 aa11.65□□□□□ -0.54
CDC42BPB-209ENST00000634889 TMEM177Q53S58 311 aa11.65□□□□□ -0.54
CDC42BPB-209ENST00000634889 RNASE12Q5GAN4 147 aaKnown RBP11.65□□□□□ -0.54
CDC42BPB-209ENST00000634889 BVESQ8NE79 360 aa11.65□□□□□ -0.54
CDC42BPB-209ENST00000634889 HARBI1Q96MB7 349 aa11.65□□□□□ -0.54
CDC42BPB-209ENST00000634889 HSPB9Q9BQS6 159 aa11.65□□□□□ -0.54
CDC42BPB-209ENST00000634889 PSMB11A5LHX3 300 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 DPPA5A6NC42 116 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 FABP12A6NFH5 140 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 M0QZ24 198 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 GSTZ1O43708 216 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 IGF1P05019 195 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 S100A5P33763 92 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 TAS2R19P59542 299 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 TSPAN5P62079 268 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 DGCR2P98153 550 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 PLGLAQ15195 96 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 RNASE10Q5GAN6 216 aaKnown RBP11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 PRR31Q5SQ13 230 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 TMEM17Q86X19 198 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 STPG2Q8N412 459 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 TMEM229BQ8NBD8 167 aa11.64□□□□□ -0.55
CDC42BPB-209ENST00000634889 OR5AU1Q8NGC0 362 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms