RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 C4orf46Q504U0 113 aa11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 TPTE2P1Q5T6R2 138 aa11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 KCTD9Q7L273 389 aa11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 CMTM1Q8IZ96 169 aa11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 HSD17B10Q99714 261 aaKnown RBP11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 OR51J1Q9H342 316 aa11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 DPM3Q9P2X0 92 aa11.48□□□□□ -0.57
PHACTR4-209ENST00000633371 TET2Q6N021 2002 aaPredicted RBP11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 TRAV40A0A0B4J280 105 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 SNRPGP15A8MWD9 76 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 H0Y980 276 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 NPFFO15130 113 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 RAMP3O60896 148 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 HLA-AP01891 365 aaKnown RBP11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 VAMP1P23763 118 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 UCP1P25874 307 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 HTR1DP28221 377 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 SAA4P35542 130 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 FBLN7Q53RD9 439 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 LIN54Q6MZP7 749 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 SGPP2Q8IWX5 399 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 CASTOR1Q8WTX7 329 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 MITD1Q8WV92 249 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 S1PR3Q99500 378 aa11.47□□□□□ -0.57
PHACTR4-209ENST00000633371 SETXQ7Z333 2677 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 TNCP24821 2201 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 IGHV1-3A0A0C4DH29 117 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 DBX1A6NMT0 343 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 H0YJW9 148 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 CD5LO43866 347 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 DUS4LO95620 317 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 IFNA2P01563 188 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 THBS3P49746 956 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 CBX3Q13185 183 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 MIDNQ504T8 468 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 OR2B11Q5JQS5 317 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 MINOS1Q5TGZ0 78 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 BRD3OSQ6XYD6 125 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 SPNS3Q6ZMD2 512 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 OR5AN1Q8NGI8 311 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 TCTEX1D2Q8WW35 142 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 CFHR4Q92496 578 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 TMEM222Q9H0R3 208 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 AMMECR1Q9Y4X0 333 aaPredicted RBP11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 HILPDAQ9Y5L2 63 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 MINOS1-NBL1R4GNA1 71 aa11.46□□□□□ -0.57
PHACTR4-209ENST00000633371 PLXNB1O43157 2135 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 A0A0B4J2A0 478 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 LEUTXA8MZ59 168 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 IL3RAP26951 378 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 LPAR6P43657 344 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 FCN2Q15485 313 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 LIAT1Q6ZQX7 453 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 TGIF2LXQ8IUE1 241 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 SELENOHQ8IZQ5 122 aaKnown RBP11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 C12orf45Q8N5I9 185 aaPredicted RBP11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 C18orf12Q96KH6 178 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 TMEM56Q96MV1 263 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 SMR3AQ99954 134 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 TMUB1Q9BVT8 246 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 SHPKQ9UHJ6 478 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 TMEM56-RWDD3S4R434 201 aa11.45□□□□□ -0.58
PHACTR4-209ENST00000633371 IGHV3-72A0A0B4J1Y9 119 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 CREBL2O60519 120 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 FCGR3BO75015 233 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 CDS2O95674 445 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 HABP2Q14520 560 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 SSX2Q16385 188 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 SPAG16Q8N0X2 631 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 BCL6BQ8N143 479 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 LRTM2Q8N967 370 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 CHAC2Q8WUX2 184 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 RPEQ96AT9 228 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 WDR89Q96FK6 387 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 ADTRPQ96IZ2 230 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 RITA1Q96K30 269 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 GPN1Q9HCN4 374 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 FAM212BQ9NTI7 297 aaPredicted RBP11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 KCNIP3Q9Y2W7 256 aa11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 SONP18583 2426 aaKnown RBP11.44□□□□□ -0.58
PHACTR4-209ENST00000633371 A0A0G2JRQ6 117 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 A0A0U1RQK1 487 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 RNF212BA8MTL3 300 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 TIMM23O14925 209 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.584e-6■■■■□ 21.2
PHACTR4-209ENST00000633371 S1PR2O95136 353 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 IGKV1-5P01602 117 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 IGKV1-16P04430 117 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 P0C879 139 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 SULT1A3P0DMM9 295 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 SULT1A4P0DMN0 295 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 CXCL3P19876 107 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 EPHA1P21709 976 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 S100GP29377 79 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 BCAP31P51572 246 aa11.43□□□□□ -0.58
PHACTR4-209ENST00000633371 LGALS4P56470 323 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms