RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
SOX2-OT-247ENST00000628347 FAM3DQ96BQ1 224 aa9.6□□□□□ -0.87
SOX2-OT-247ENST00000628347 FAM103A1Q9BTL3 118 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-247ENST00000628347 CABLES2Q9BTV7 478 aa9.6□□□□□ -0.87
SOX2-OT-247ENST00000628347 RDH8Q9NYR8 311 aa9.6□□□□□ -0.87
SOX2-OT-247ENST00000628347 CSMD3Q7Z407 3707 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 DENRO43583 198 aaKnown RBP9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 BRI3O95415 125 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 HSMCR30P0CW71 290 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 GP9P14770 177 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 CALRP27797 417 aaKnown RBP9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 AQP4P55087 323 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 TPPP2P59282 170 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 RPS16P62249 146 aaKnown RBP9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 PITPNAQ00169 270 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 C2orf76Q3KRA6 126 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 PRSS48Q7RTY5 328 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 DRAXINQ8NBI3 349 aaPredicted RBP9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 CLCC1Q96S66 551 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 ACOT13Q9NPJ3 140 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 NKX1-2Q9UD57 310 aaPredicted RBP9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 RAB22AQ9UL26 194 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 V9GY05 133 aa9.59□□□□□ -0.87
SOX2-OT-247ENST00000628347 TMEM272A0A1B0GTI8 110 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 ERICH4A6NGS2 130 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 FABP7O15540 132 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 IGLV2-23P01705 113 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 IGHV3-11P01762 117 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 TRGV3P03979 118 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 CRYGBP07316 175 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 SNRPBP14678 240 aaKnown RBP9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 CRHBPP24387 322 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 LGALS7P47929 136 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 CLDN12P56749 244 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 LINC00205P59089 165 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 SSBP2P81877 361 aaPredicted RBP9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 FABP5Q01469 135 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 TAGLNQ01995 201 aaKnown RBP9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 FXYD3Q14802 87 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 MOGAT2Q3SYC2 334 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 SBSPONQ8IVN8 264 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 POC5Q8NA72 575 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 NRG4Q8WWG1 115 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 TMEM68Q96MH6 324 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 MS4A10Q96PG2 267 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 MGLLQ99685 303 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 SLC35D1Q9NTN3 355 aa9.58□□□□□ -0.88
SOX2-OT-247ENST00000628347 TRBV6-7A0A0A0MS04 114 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 M0R1X1 148 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 SLC25A17O43808 307 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 FCGR3AP08637 254 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 CD3GP09693 182 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 PLA2G7Q13093 441 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 TMEM177Q53S58 311 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 OR4C12Q96R67 309 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 ELOVL1Q9BW60 279 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 RANGRFQ9HD47 186 aaPredicted RBP9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 SDHAF2Q9NX18 166 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 STUB1Q9UNE7 303 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 KCNK7Q9Y2U2 307 aa9.57□□□□□ -0.88
SOX2-OT-247ENST00000628347 TRAV1-2A0A0B4J238 106 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 A0A0G2JLM5 398 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 TRIM64CA6NLI5 447 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 MFNGO00587 321 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 PDCD5O14737 125 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 IGLV1-51P01701 117 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 FRMD6-AS1P0C7T7 363 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 RAB6AP20340 208 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 ZP3P21754 424 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 MRPS15P82914 257 aaKnown RBP9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 TBCEQ15813 527 aaPredicted RBP9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 SRSF7Q16629 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 Q6ZS49 121 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 OR10R2Q8NGX6 335 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 GRPEL2Q8TAA5 225 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 RAB3CQ96E17 227 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 CENPOQ9BU64 300 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 CCDC90BQ9GZT6 254 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 OR2D2Q9H210 308 aa9.56□□□□□ -0.88
SOX2-OT-247ENST00000628347 C13orf42A0A1B0GVH6 325 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 A8MZ25 164 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 ANKRD65E5RJM6 399 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 RAB27BO00194 218 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 BET1O15155 118 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 GSTT2P0CG29 244 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 GSTT2BP0CG30 244 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 RRASP10301 218 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 GADD45AP24522 165 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 MAP2K4P45985 399 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 CBX3Q13185 183 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 SSX1Q16384 188 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 IGSF11Q5DX21 431 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 HES5Q5TA89 166 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 ZNF367Q7RTV3 350 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 OVCH2Q7RTZ1 564 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 OR10J5Q8NHC4 309 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 MUC7Q8TAX7 377 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 C5orf30Q96GV9 206 aa9.55□□□□□ -0.88
SOX2-OT-247ENST00000628347 HARBI1Q96MB7 349 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms