RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 MFSD4AQ8N468 514 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 DRAXINQ8NBI3 349 aaPredicted RBP11.78□□□□□ -0.52
PNKP-221ENST00000627317 S100ZQ8WXG8 99 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 BORCS5Q969J3 196 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 C5orf30Q96GV9 206 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 AKR1E2Q96JD6 320 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 FXYD6Q9H0Q3 95 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 AKIP1Q9NQ31 210 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 C1RLQ9NZP8 487 aa11.78□□□□□ -0.52
PNKP-221ENST00000627317 VWFP04275 2813 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 FAM90A9PA6NNJ1 464 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 DISC1C4P0D8 188 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 H7C2Y5 167 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 CHST1O43916 411 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 CT45A6P0DMU7 189 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 CT45A5P0DMU8 189 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 CT45A7P0DMV0 189 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 MDKP21741 143 aaPredicted RBP11.77□□□□□ -0.53
PNKP-221ENST00000627317 FAUP35544 74 aaKnown RBP11.77□□□□□ -0.53
PNKP-221ENST00000627317 THBS3P49746 956 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 MSMO1Q15800 293 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 SCGB2B2Q4G0G5 96 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 FAAP20Q6NZ36 180 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 C16orf82Q7Z2V1 217 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 TOMM5Q8N4H5 51 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 OR4D10Q8NGI6 311 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 OR4C16Q8NGL9 310 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 OR2T10Q8NGZ9 312 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 ADTRPQ96IZ2 230 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 SLC25A33Q9BSK2 321 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 CCL28Q9NRJ3 127 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 WASHC3Q9Y3C0 194 aa11.77□□□□□ -0.53
PNKP-221ENST00000627317 H0YJW9 148 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 PROP1O75360 226 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 OR2F2O95006 317 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 MOSP00540 346 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 PGAM2P15259 253 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 MC5RP33032 325 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 CBX3Q13185 183 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
PNKP-221ENST00000627317 FBLN7Q53RD9 439 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 ZNF57Q68EA5 555 aaPredicted RBP11.76□□□□□ -0.53
PNKP-221ENST00000627317 CCBE1Q6UXH8 406 aaPredicted RBP11.76□□□□□ -0.53
PNKP-221ENST00000627317 KCTD9Q7L273 389 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 ZNF383Q8NA42 475 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 EAF1Q96JC9 268 aaPredicted RBP11.76□□□□□ -0.53
PNKP-221ENST00000627317 RBM14Q96PK6 669 aaKnown RBP11.76□□□□□ -0.53
PNKP-221ENST00000627317 SLC35D1Q9NTN3 355 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 MCUBQ9NWR8 336 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 MOB4Q9Y3A3 225 aa11.76□□□□□ -0.53
PNKP-221ENST00000627317 S100GP29377 79 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 DUTP33316 252 aaKnown RBP11.75□□□□□ -0.53
PNKP-221ENST00000627317 PPP5CP53041 499 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 RAG2P55895 527 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 LINC00205P59089 165 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 TAGLNQ01995 201 aaKnown RBP11.75□□□□□ -0.53
PNKP-221ENST00000627317 EBI3Q14213 229 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 RTL8BQ17RB0 113 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 LPCAT3Q6P1A2 487 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 ZNF818PQ6ZRF7 136 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 ZBTB34Q8NCN2 500 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 OR5AN1Q8NGI8 311 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 OR4C13Q8NGP0 309 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 TCTEX1D2Q8WW35 142 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 WFDC12Q8WWY7 111 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 HSD17B10Q99714 261 aaKnown RBP11.75□□□□□ -0.53
PNKP-221ENST00000627317 PRRT1Q99946 306 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 WDR12Q9GZL7 423 aaKnown RBP11.75□□□□□ -0.53
PNKP-221ENST00000627317 NPFFR1Q9GZQ6 430 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 PRELID3BQ9Y3B1 194 aa11.75□□□□□ -0.53
PNKP-221ENST00000627317 TNFSF12O43508 249 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 IGLV2-14P01704 120 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 CATR1Q13166 79 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 ZNF846Q147U1 533 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 BAK1Q16611 211 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 AADACL3Q5VUY0 350 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 SHISA2Q6UWI4 295 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 ZNF66Q6ZN08 573 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 LHFPL1Q86WI0 220 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 CMTM1Q8IZ96 169 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 SLC38A6Q8IZM9 456 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 TERB2Q8NHR7 220 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 DEDD2Q8WXF8 326 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 SDHCQ99643 169 aaPredicted RBP11.74□□□□□ -0.53
PNKP-221ENST00000627317 SCP2D1Q9UJQ7 156 aa11.74□□□□□ -0.53
PNKP-221ENST00000627317 NCBP2LA6PVI3 153 aaKnown RBP11.73□□□□□ -0.53
PNKP-221ENST00000627317 LINC00473A8K010 186 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 M0QZK8 103 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 GPR31O00270 319 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 ZNF735P0CB33 412 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 RRASP10301 218 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 IL7P13232 177 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 GNRHRP30968 328 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 ECI1P42126 302 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 UCP3P55916 312 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 MMDQ15546 238 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 PHLDA2Q53GA4 152 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 OR2B11Q5JQS5 317 aa11.73□□□□□ -0.53
PNKP-221ENST00000627317 Q8N6K4 173 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms