RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 TMEM267Q0VDI3 215 aaPredicted RBP17.5■□□□□ 0.39
SF1-220ENST00000626028 CBX3Q13185 183 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 PLGLAQ15195 96 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 ZNF562Q6V9R5 426 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 ETV3LQ6ZN32 361 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 MYOZ3Q8TDC0 251 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 RBMXL1Q96E39 390 aaKnown RBP17.5■□□□□ 0.39
SF1-220ENST00000626028 P2RX4Q99571 388 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 MCRIP2Q9BUT9 160 aaKnown RBP17.5■□□□□ 0.39
SF1-220ENST00000626028 FBXL15Q9H469 300 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 PARP11Q9NR21 331 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 SLC35D1Q9NTN3 355 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 IGKV1D-8A0A087WSZ0 117 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 TRAV41A0A0B4J266 112 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 IGLV1-40P01703 118 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 RPS16P62249 146 aaKnown RBP17.49■□□□□ 0.39
SF1-220ENST00000626028 CX3CL1P78423 397 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 RTL8BQ17RB0 113 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 TMEM65Q6PI78 240 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 C8orf86Q6ZUL3 223 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 MRPL41Q8IXM3 137 aaKnown RBP17.49■□□□□ 0.39
SF1-220ENST00000626028 MINDY2Q8NBR6 621 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 OR5H6Q8NGV6 325 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 NUDCD2Q8WVJ2 157 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 KCTD12Q96CX2 325 aaKnown RBP17.49■□□□□ 0.39
SF1-220ENST00000626028 UBE2E2Q96LR5 201 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 NECAP2Q9NVZ3 263 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 ANXA10Q9UJ72 324 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 OR2W1Q9Y3N9 320 aa17.49■□□□□ 0.39
SF1-220ENST00000626028 SSX5O60225 188 aa17.48■□□□□ 0.39
SF1-220ENST00000626028 PSG5Q15238 335 aa17.48■□□□□ 0.39
SF1-220ENST00000626028 C4orf3Q8WVX3 66 aa17.48■□□□□ 0.39
SF1-220ENST00000626028 METTL1Q9UBP6 276 aaKnown RBP17.48■□□□□ 0.39
SF1-220ENST00000626028 TNCP24821 2201 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 TRAV18A0A075B6X5 111 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 HLA-DQB1P01920 261 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 IGLL1P15814 213 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 RPS19P39019 145 aaKnown RBP17.47■□□□□ 0.39
SF1-220ENST00000626028 CBX5P45973 191 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 LUMP51884 338 aaPredicted RBP17.47■□□□□ 0.39
SF1-220ENST00000626028 AKIRIN2Q53H80 203 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 C19orf54Q5BKX5 351 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 PYHIN1Q6K0P9 492 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 ZNF645Q8N7E2 425 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 S100A16Q96FQ6 103 aaKnown RBP17.47■□□□□ 0.39
SF1-220ENST00000626028 NUBP2Q9Y5Y2 271 aa17.47■□□□□ 0.39
SF1-220ENST00000626028 PRKDCP78527 4128 aaKnown RBP17.47■□□□□ 0.39
SF1-220ENST00000626028 G3V318 75 aa17.46■□□□□ 0.39
SF1-220ENST00000626028 CCL24O00175 119 aa17.46■□□□□ 0.39
SF1-220ENST00000626028 XRCC3O43542 346 aa17.46■□□□□ 0.39
SF1-220ENST00000626028 TMEM177Q53S58 311 aa17.46■□□□□ 0.39
SF1-220ENST00000626028 UBE2NLQ5JXB2 153 aa17.46■□□□□ 0.39
SF1-220ENST00000626028 PPP1R27Q86WC6 154 aa17.46■□□□□ 0.39
SF1-220ENST00000626028 WSB1Q9Y6I7 421 aa17.46■□□□□ 0.39
SF1-220ENST00000626028 DUTP33316 252 aaKnown RBP17.45■□□□□ 0.38
SF1-220ENST00000626028 RUNX1Q01196 453 aa17.45■□□□□ 0.38
SF1-220ENST00000626028 HOGA1Q86XE5 327 aa17.45■□□□□ 0.38
SF1-220ENST00000626028 BEST4Q8NFU0 473 aa17.45■□□□□ 0.38
SF1-220ENST00000626028 OR5M8Q8NGP6 311 aa17.45■□□□□ 0.38
SF1-220ENST00000626028 DDB2Q92466 427 aa17.45■□□□□ 0.38
SF1-220ENST00000626028 SLC25A46Q96AG3 418 aa17.45■□□□□ 0.38
SF1-220ENST00000626028 AUNIPQ9H7T9 357 aa17.45■□□□□ 0.38
SF1-220ENST00000626028 FOXA2Q9Y261 457 aaPredicted RBP17.45■□□□□ 0.38
SF1-220ENST00000626028 FCN1O00602 326 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 LINC00205P59089 165 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 NDPQ00604 133 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 MSMO1Q15800 293 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 FOXB2Q5VYV0 432 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 C18orf65Q6ZTR6 163 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 OR13F1Q8NGS4 319 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 OSR1Q8TAX0 266 aaPredicted RBP17.44■□□□□ 0.38
SF1-220ENST00000626028 RAX2Q96IS3 184 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 HARBI1Q96MB7 349 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 CMTM3Q96MX0 182 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 FUNDC2Q9BWH2 189 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 ZMAT5Q9UDW3 170 aaKnown RBP17.44■□□□□ 0.38
SF1-220ENST00000626028 VSIG4Q9Y279 399 aa17.44■□□□□ 0.38
SF1-220ENST00000626028 SHOXO15266 292 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 SLC25A17O43808 307 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 TUSC2O75896 110 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 EGR2P11161 476 aaPredicted RBP17.43■□□□□ 0.38
SF1-220ENST00000626028 CD40LGP29965 261 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 RAB9AP51151 201 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 ARPC4P59998 168 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 ZNF491Q8N8L2 437 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 DPF1Q92782 380 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 C5orf30Q96GV9 206 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 TMEM68Q96MH6 324 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 PRELID3BQ9Y3B1 194 aa17.43■□□□□ 0.38
SF1-220ENST00000626028 CA2P00918 260 aa17.42■□□□□ 0.38
SF1-220ENST00000626028 IGLV2-23P01705 113 aa17.42■□□□□ 0.38
SF1-220ENST00000626028 CRYGBP07316 175 aa17.42■□□□□ 0.38
SF1-220ENST00000626028 NFYAP23511 347 aaPredicted RBP17.42■□□□□ 0.38
SF1-220ENST00000626028 TGFBR1P36897 503 aa17.42■□□□□ 0.38
SF1-220ENST00000626028 LSM3P62310 102 aaKnown RBP17.42■□□□□ 0.38
SF1-220ENST00000626028 EGFEM1PQ0D2K5 195 aa17.42■□□□□ 0.38
SF1-220ENST00000626028 FHL3Q13643 280 aa17.42■□□□□ 0.38
SF1-220ENST00000626028 KIAA0141Q14154 515 aaPredicted RBP17.42■□□□□ 0.38
SF1-220ENST00000626028 ACTBL2Q562R1 376 aa17.42■□□□□ 0.38
SF1-220ENST00000626028 LCNL1Q6ZST4 164 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms