RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PMS2P5A8MQ11 134 aa12.76□□□□□ -0.37
LINC00552-201ENST00000625151 WNT9BO14905 357 aa12.76□□□□□ -0.37
LINC00552-201ENST00000625151 KBTBD11O94819 623 aa12.76□□□□□ -0.37
LINC00552-201ENST00000625151 TFF1P04155 84 aa12.76□□□□□ -0.37
LINC00552-201ENST00000625151 TMEM241Q24JQ0 296 aa12.76□□□□□ -0.37
LINC00552-201ENST00000625151 CXorf67Q86X51 503 aaPredicted RBP12.76□□□□□ -0.37
LINC00552-201ENST00000625151 OR4X1Q8NH49 305 aa12.76□□□□□ -0.37
LINC00552-201ENST00000625151 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
LINC00552-201ENST00000625151 KLF13Q9Y2Y9 288 aaPredicted RBP12.76□□□□□ -0.37
LINC00552-201ENST00000625151 PRR14LQ5THK1 2151 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 PTPRBP23467 1997 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 C17orf98A8MV24 154 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 C21orf140B9A014 251 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 ZG16O60844 167 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 PFN1P07737 140 aaKnown RBP12.75□□□□□ -0.37
LINC00552-201ENST00000625151 RPL23P62829 140 aaKnown RBP12.75□□□□□ -0.37
LINC00552-201ENST00000625151 TFF3Q07654 80 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 PSG7Q13046 419 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 GAMTQ14353 236 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 BTNL3Q6UXE8 466 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 OR10A7Q8NGE5 316 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 GALMQ96C23 342 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 KCNIP1Q9NZI2 227 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 TMEM30CPA0ZSE6 113 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 KLRC4-KLRK1H3BQV0 150 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 FGF7P21781 194 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 AESQ08117 197 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 RNFT1Q5M7Z0 435 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 ZNF826PQ6ZT77 177 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 DEFB124Q8NES8 71 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 OR10G9Q8NGN4 311 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 OR10G7Q8NGN6 311 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 PACRGQ96M98 296 aaPredicted RBP12.75□□□□□ -0.37
LINC00552-201ENST00000625151 HIST1H2BLQ99880 126 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 TMEM147Q9BVK8 224 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 PARLQ9H300 379 aa12.75□□□□□ -0.37
LINC00552-201ENST00000625151 LOC400499M0QZD8 3231 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 CTXND1A0A1B0GTU2 59 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 LY86O95711 162 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 DEFA4P12838 97 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 RAC2P15153 192 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 IL2RGP31785 369 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 PSMB3P49720 205 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 LINC00205P59089 165 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 TRIP6Q15654 476 aaKnown RBP12.74□□□□□ -0.37
LINC00552-201ENST00000625151 MSMO1Q15800 293 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 BSXQ3C1V8 233 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 Q6ZR03 302 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 PIP4P1Q86T03 277 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 HES4Q9HCC6 221 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 GFOD1Q9NXC2 390 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 GAB2Q9UQC2 676 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 LAMA5O15230 3695 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 DSPP15924 2871 aaKnown RBP12.74□□□□□ -0.37
LINC00552-201ENST00000625151 J3QW42 95 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 HBZP02008 142 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 GZMHP20718 246 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 MPV17P39210 176 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 RTP5Q14D33 572 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 SPINK9Q5DT21 86 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 FFAR4Q5NUL3 377 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 HES3Q5TGS1 186 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 ZBTB34Q8NCN2 500 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 DTD1Q8TEA8 209 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 RHOVQ96L33 236 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 SRD5A3Q9H8P0 318 aa12.74□□□□□ -0.37
LINC00552-201ENST00000625151 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.74□□□□□ -0.37
LINC00552-201ENST00000625151 SPENQ96T58 3664 aaKnown RBP12.73□□□□□ -0.37
LINC00552-201ENST00000625151 IQCF6A8MYZ5 107 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 TMEM250H0YL14 139 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 LYZL6O75951 148 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 IGHV1-2P23083 117 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 MRPL49Q13405 166 aaKnown RBP12.73□□□□□ -0.37
LINC00552-201ENST00000625151 LBHQ53QV2 105 aaPredicted RBP12.73□□□□□ -0.37
LINC00552-201ENST00000625151 OR4F5Q8NH21 305 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 OR4F4Q96R69 305 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 PYGO2Q9BRQ0 406 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 ELOVL1Q9BW60 279 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 PITPNC1Q9UKF7 332 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 LAMP3Q9UQV4 416 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 SPAARA0A1B0GVQ0 90 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 MLNRO43193 412 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 TUBG1P23258 451 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 PMP22Q01453 160 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 COL10A1Q03692 680 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 ATP6V1FQ16864 119 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 C21orf62-AS1Q17RA5 79 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 OR51G1Q8NGK1 321 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 MRGPRDQ8TDS7 321 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 S100PBPQ96BU1 408 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 COQ2Q96H96 371 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 NPCDR1Q9BY65 106 aa12.73□□□□□ -0.37
LINC00552-201ENST00000625151 HCFC1P51610 2035 aa12.72□□□□□ -0.37
LINC00552-201ENST00000625151 CNOT1A5YKK6 2376 aaKnown RBP12.72□□□□□ -0.37
LINC00552-201ENST00000625151 TRGV5A0A0B4J1U4 118 aa12.72□□□□□ -0.37
LINC00552-201ENST00000625151 OOEPA6NGQ2 149 aa12.72□□□□□ -0.37
LINC00552-201ENST00000625151 BPIFB3P59826 476 aa12.72□□□□□ -0.37
LINC00552-201ENST00000625151 UBE2NP61088 152 aaKnown RBP12.72□□□□□ -0.37
LINC00552-201ENST00000625151 CATR1Q13166 79 aa12.72□□□□□ -0.37
LINC00552-201ENST00000625151 GABRA6Q16445 453 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms