RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 HBG2P69892 147 aa11.02□□□□□ -0.64
CHD1L-210ENST00000622533 OR1L6Q8NGR2 347 aa11.02□□□□□ -0.64
CHD1L-210ENST00000622533 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.64
CHD1L-210ENST00000622533 PINX1Q96BK5 328 aaKnown RBP11.02□□□□□ -0.64
CHD1L-210ENST00000622533 HS3ST6Q96QI5 342 aa11.02□□□□□ -0.64
CHD1L-210ENST00000622533 PARD6GQ9BYG4 376 aaPredicted RBP11.02□□□□□ -0.64
CHD1L-210ENST00000622533 ZDHHC11Q9H8X9 412 aa11.02□□□□□ -0.64
CHD1L-210ENST00000622533 TRAV34A0A0B4J273 112 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 IGKV1-6A0A0C4DH72 117 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 LNP1A1A4G5 178 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 DEGS1O15121 323 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 MRPL33O75394 65 aaKnown RBP11.02□□□□□ -0.65
CHD1L-210ENST00000622533 SOX8P57073 446 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 ZNF468Q5VIY5 522 aaPredicted RBP11.02□□□□□ -0.65
CHD1L-210ENST00000622533 ZNF114Q8NC26 417 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 PSMF1Q92530 271 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 CLDN23Q96B33 292 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 TUBG2Q9NRH3 451 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 ZNHIT1O43257 154 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 CBLN1P23435 193 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 LCN2P80188 198 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 MTCH1Q9NZJ7 389 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 IL36RNQ9UBH0 155 aa11.02□□□□□ -0.65
CHD1L-210ENST00000622533 TNRC6BQ9UPQ9 1833 aaKnown RBP11.01□□□□□ -0.65
CHD1L-210ENST00000622533 IGKV3D-15A0A087WSY6 115 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 NPIPB11E5RHQ5 1161 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 TDGF1P13385 188 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 SPINK2P20155 84 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 UBE2G2P60604 165 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 UBE2NP61088 152 aaKnown RBP11.01□□□□□ -0.65
CHD1L-210ENST00000622533 ZNF324BQ6AW86 544 aaPredicted RBP11.01□□□□□ -0.65
CHD1L-210ENST00000622533 PCSK4Q6UW60 755 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 CD300LBA8K4G0 201 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 C3orf80F5H4A9 247 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 OR5G3P0C626 314 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 COMPP49747 757 aaPredicted RBP11.01□□□□□ -0.65
CHD1L-210ENST00000622533 KRTDAPP60985 99 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 HLA-BQ31612 363 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 LEMD1Q68G75 181 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 TMPRSS7Q7RTY8 843 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 TMEM144Q7Z5S9 345 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 LINC01551Q86U37 167 aa11.01□□□□□ -0.65
CHD1L-210ENST00000622533 NEIL1Q96FI4 390 aaPredicted RBP11.01□□□□□ -0.65
CHD1L-210ENST00000622533 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
CHD1L-210ENST00000622533 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 WIPI1Q5MNZ9 446 aaPredicted RBP11□□□□□ -0.65
CHD1L-210ENST00000622533 FFAR4Q5NUL3 377 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 MOB1BQ7L9L4 216 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 OR10G9Q8NGN4 311 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 OR10G7Q8NGN6 311 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 SAMD10Q9BYL1 202 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 UBE2ZQ9H832 354 aaPredicted RBP11□□□□□ -0.65
CHD1L-210ENST00000622533 ELOVL5Q9NYP7 299 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 A0A0G2JMM0 328 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 A0A1W2PPB8 328 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 A0A1W2PRS3 328 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 KIR3DP1A8MWS1 328 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 C11orf94C9JXX5 98 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 IGKV1-39P01597 117 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 IGKV1D-39P04432 117 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 GDF1P27539 372 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 DUSP3P51452 185 aaPredicted RBP11□□□□□ -0.65
CHD1L-210ENST00000622533 SELENOTP62341 195 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 RANP62826 216 aaKnown RBP11□□□□□ -0.65
CHD1L-210ENST00000622533 ARF1P84077 181 aaKnown RBP11□□□□□ -0.65
CHD1L-210ENST00000622533 MSMO1Q15800 293 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 OR5AU1Q8NGC0 362 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 ABHD3Q8WU67 409 aa11□□□□□ -0.65
CHD1L-210ENST00000622533 YLPM1P49750 1951 aaKnown RBP11□□□□□ -0.65
CHD1L-210ENST00000622533 C5orf49A4QMS7 147 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 OR5B21A6NL26 309 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 ARR3P36575 388 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 BAGE3Q86Y29 109 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 BAGE2Q86Y30 109 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 OR5P3Q8WZ94 311 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 LIN7CQ9NUP9 197 aaKnown RBP10.99□□□□□ -0.65
CHD1L-210ENST00000622533 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 FAM186AA6NE01 2351 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 SH2D1BO14796 132 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 RBFOX2O43251 390 aaKnown RBP eCLIP10.99□□□□□ -0.653e-13■■■■□ 26.2
CHD1L-210ENST00000622533 NDUFB4O95168 129 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 RFPL3SP0C7P2 107 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 FRMD6-AS1P0C7T7 363 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 CCNOP22674 350 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 THBS3P49746 956 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 GFRA1P56159 465 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 SSPNQ14714 243 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 FGF23Q9GZV9 251 aaPredicted RBP10.99□□□□□ -0.65
CHD1L-210ENST00000622533 MPC1Q9Y5U8 109 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 SDK2Q58EX2 2172 aa10.99□□□□□ -0.65
CHD1L-210ENST00000622533 ZFHX4Q86UP3 3567 aa10.98□□□□□ -0.65
CHD1L-210ENST00000622533 EP300Q09472 2414 aaPredicted RBP10.98□□□□□ -0.65
CHD1L-210ENST00000622533 CTXND1A0A1B0GTU2 59 aa10.98□□□□□ -0.65
CHD1L-210ENST00000622533 NKX6-3A6NJ46 265 aa10.98□□□□□ -0.65
CHD1L-210ENST00000622533 NTN3O00634 580 aaPredicted RBP10.98□□□□□ -0.65
CHD1L-210ENST00000622533 MLNRO43193 412 aa10.98□□□□□ -0.65
CHD1L-210ENST00000622533 SS18L1O75177 396 aaPredicted RBP10.98□□□□□ -0.65
CHD1L-210ENST00000622533 CRISP2P16562 243 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms