RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CRYBB3P26998 211 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 REG1BP48304 166 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 SRSF4Q08170 494 aaKnown RBP8.58□□□□□ -1.04
COL4A6-210ENST00000621266 RTP5Q14D33 572 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 C16orf47Q6ZP98 133 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-210ENST00000621266 PRSS41Q7RTY9 318 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 LAMTOR2Q9Y2Q5 125 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 RPL36A-HNRNPH2H7BZ11 118 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 CDIPTO14735 213 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 EGR1P18146 543 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 FOXA3P55318 350 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-210ENST00000621266 CXorf66Q5JRM2 361 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-210ENST00000621266 TMEM211Q6ICI0 200 aa8.58□□□□□ -1.04
COL4A6-210ENST00000621266 TRAV17A0A0B4J275 112 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 SYNGR1O43759 233 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 H2BFSP57053 126 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 MRPS16Q9Y3D3 137 aaKnown RBP8.57□□□□□ -1.04
COL4A6-210ENST00000621266 KIAA1217Q5T5P2 1943 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 DRD3P35462 400 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 FUT5Q11128 374 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 IL11RAQ14626 422 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 CBLN3Q6UW01 205 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 FAM19A2Q8N3H0 131 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 TMUB1Q9BVT8 246 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 ST6GALNAC2Q9UJ37 374 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 SIRT4Q9Y6E7 314 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-210ENST00000621266 ATRAIDQ6UW56 229 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 TTC9CQ8N5M4 171 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 GALNT14Q96FL9 552 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 IGHV1OR21-1A0A087WYE8 117 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 PPIAL4DF5H284 164 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 LIPFP07098 398 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 LINC00614P0C842 121 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 TAF15Q92804 592 aaKnown RBP eCLIP8.57□□□□□ -1.04
COL4A6-210ENST00000621266 PSMG3Q9BT73 122 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-210ENST00000621266 RNF122Q9H9V4 155 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 NUP205Q92621 2012 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 COL24A1Q17RW2 1714 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 TNS1Q9HBL0 1735 aaKnown RBP8.57□□□□□ -1.04
COL4A6-210ENST00000621266 CEACAM18A8MTB9 384 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 ANOS1P23352 680 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 TMEM170BQ5T4T1 132 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 VSTM2LQ96N03 204 aa8.57□□□□□ -1.04
COL4A6-210ENST00000621266 SSBP4Q9BWG4 385 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-210ENST00000621266 SLC17A3O00476 420 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 TRBV9A0A0B4J1U6 114 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 A0A0U1RQV5 110 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 OR11H12B2RN74 326 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 H3BTX0 84 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 ZIC3O60481 467 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 EML2O95834 649 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 P2RY6Q15077 328 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 ECSCRQ19T08 205 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 SNAI3Q3KNW1 292 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 RFLNBQ8N5W9 214 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 OR11H1Q8NG94 326 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 OR1L8Q8NGR8 309 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 OR11H2Q8NH07 326 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 COPS9Q8WXC6 57 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 GPR35Q9HC97 309 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 NPIPB6E9PJ23 425 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 RRHO14718 337 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 CT62P0C5K7 136 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 CEACAM3P40198 252 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 C1QL3Q5VWW1 255 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 LINC00869P0C866 280 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 TMEM78Q5T7P6 136 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 GPHA2Q96T91 129 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 VCX2Q9H322 139 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 FGF5P12034 268 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 P2RY4P51582 365 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 LINC01555Q8NAE3 123 aa8.56□□□□□ -1.04
COL4A6-210ENST00000621266 COL11A1P12107 1806 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-210ENST00000621266 TRAV8-4A0A0B4J246 113 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 CTSVO60911 334 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 ASAH2BP0C7U1 165 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 DANCRP0C864 163 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 HOXA5P20719 270 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 GPR6P46095 362 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-210ENST00000621266 COX14Q96I36 57 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 NPFFR1Q9GZQ6 430 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 LHX9Q9NQ69 397 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 MPC1Q9Y5U8 109 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 TTC3P53804 2025 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 HOXB3P14651 431 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-210ENST00000621266 WDR34Q96EX3 536 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 AQP10Q96PS8 301 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 NDUFAF3Q9BU61 184 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 FLRT3Q9NZU0 649 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 SFTPCP11686 197 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 SYT8Q8NBV8 401 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 MARVELD3Q96A59 401 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 SMAD7O15105 426 aaKnown RBP8.55□□□□□ -1.04
COL4A6-210ENST00000621266 NDUFA3O95167 84 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 HLA-DQB1P01920 261 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 MOGAT3Q86VF5 341 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 NEUROG1Q92886 237 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 ZNF488Q96MN9 340 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 KLHDC2Q9Y2U9 406 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms