RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 WFDC1Q9HC57 220 aa17.77■□□□□ 0.44
SGMS1-210ENST00000619438 LYRM2Q9NU23 88 aaPredicted RBP17.77■□□□□ 0.44
SGMS1-210ENST00000619438 LIN7CQ9NUP9 197 aaKnown RBP17.77■□□□□ 0.44
SGMS1-210ENST00000619438 KCNS2Q9ULS6 477 aa17.77■□□□□ 0.44
SGMS1-210ENST00000619438 CEACAM6P40199 344 aa17.77■□□□□ 0.43
SGMS1-210ENST00000619438 EWSR1Q01844 656 aaKnown RBP eCLIP17.77■□□□□ 0.438e-7■■■□□ 16.1
SGMS1-210ENST00000619438 PXDC1Q5TGL8 231 aa17.77■□□□□ 0.43
SGMS1-210ENST00000619438 LINC01356Q8N9X3 169 aa17.77■□□□□ 0.43
SGMS1-210ENST00000619438 GALMQ96C23 342 aa17.77■□□□□ 0.43
SGMS1-210ENST00000619438 COQ2Q96H96 371 aa17.77■□□□□ 0.43
SGMS1-210ENST00000619438 FAM212BQ9NTI7 297 aaPredicted RBP17.77■□□□□ 0.43
SGMS1-210ENST00000619438 TMEM106BQ9NUM4 274 aa17.77■□□□□ 0.43
SGMS1-210ENST00000619438 TMEM218A2RU14 115 aa17.76■□□□□ 0.43
SGMS1-210ENST00000619438 RNF212BA8MTL3 300 aa17.76■□□□□ 0.43
SGMS1-210ENST00000619438 C12orf77C9JDV5 145 aa17.76■□□□□ 0.43
SGMS1-210ENST00000619438 PSG2P11465 335 aa17.76■□□□□ 0.43
SGMS1-210ENST00000619438 POLR2GP62487 172 aaKnown RBP eCLIP17.76■□□□□ 0.43
SGMS1-210ENST00000619438 CXorf66Q5JRM2 361 aaPredicted RBP17.76■□□□□ 0.43
SGMS1-210ENST00000619438 LYPD6BQ8NI32 183 aa17.76■□□□□ 0.43
SGMS1-210ENST00000619438 MEGF10Q96KG7 1140 aa17.76■□□□□ 0.43
SGMS1-210ENST00000619438 ABCA2Q9BZC7 2435 aa17.76■□□□□ 0.43
SGMS1-210ENST00000619438 SRRM5B3KS81 715 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 CRLF1O75462 422 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 MED6O75586 246 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 SPP1P10451 314 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 TRAT1Q6PIZ9 186 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 BTNL8Q6UX41 500 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 PRR18Q8N4B5 295 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 OR51H1Q8NH63 302 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 GCM1Q9NP62 436 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 UFSP2Q9NUQ7 469 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 PLA2G2EQ9NZK7 142 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 JMJD1CQ15652 2540 aa17.75■□□□□ 0.43
SGMS1-210ENST00000619438 B4DSR2 109 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 LPAR6P43657 344 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 NHLH2Q02577 135 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 COL10A1Q03692 680 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 BAXQ07812 192 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 DRAM1Q8N682 238 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 ZNF645Q8N7E2 425 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 LRRC29Q8WV35 223 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 GPR146Q96CH1 333 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 FBXO24O75426 580 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 OR8U9P0C7N5 309 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 RAB5CP51148 216 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 CAV2P51636 162 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 VAMP2P63027 116 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 AESQ08117 197 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 C10orf91Q5T1B1 145 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 OR8U1Q8NH10 309 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 RAB39BQ96DA2 213 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 LPAR2Q9HBW0 351 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 DCAF16Q9NXF7 216 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 TMA7Q9Y2S6 64 aaKnown RBP17.74■□□□□ 0.43
SGMS1-210ENST00000619438 RBM7Q9Y580 266 aaKnown RBP17.74■□□□□ 0.43
SGMS1-210ENST00000619438 SVEP1Q4LDE5 3571 aa17.74■□□□□ 0.43
SGMS1-210ENST00000619438 IGSF23A1L1A6 192 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 SSSCA1O60232 199 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 IGKV1-39P01597 117 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 HBZP02008 142 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 APOC3P02656 99 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 IGKV1D-39P04432 117 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 F2RL1P55085 397 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 LMO4P61968 165 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 ZNF266Q14584 549 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 MOGAT3Q86VF5 341 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 TMEM252Q8N6L7 170 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 OR1L1Q8NH94 360 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 FAM216AQ8WUB2 273 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 PARP12Q9H0J9 701 aaKnown RBP17.73■□□□□ 0.43
SGMS1-210ENST00000619438 ZNF665Q9H7R5 613 aa17.73■□□□□ 0.43
SGMS1-210ENST00000619438 A0A0G2JRQ6 117 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 FAM24AA6NFZ4 105 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 LRRC30A6NM36 301 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 KIAA1324LA8MWY0 1029 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-210ENST00000619438 IRF2P14316 349 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 PRDX2P32119 198 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 ZNF585BQ52M93 769 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 KRBOX4Q5JUW0 171 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 SPAG16Q8N0X2 631 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 CD177Q8N6Q3 437 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 CDC42EP3Q9UKI2 254 aa17.72■□□□□ 0.43
SGMS1-210ENST00000619438 ZNF737O75373 536 aa17.71■□□□□ 0.43
SGMS1-210ENST00000619438 EIF4EBP1Q13541 118 aaPredicted RBP17.71■□□□□ 0.43
SGMS1-210ENST00000619438 BOLLQ8N9W6 283 aaKnown RBP17.71■□□□□ 0.43
SGMS1-210ENST00000619438 RAB40CQ96S21 281 aa17.71■□□□□ 0.43
SGMS1-210ENST00000619438 STRAPQ9Y3F4 350 aaKnown RBP17.71■□□□□ 0.43
SGMS1-210ENST00000619438 MALRD1Q5VYJ5 2156 aa17.71■□□□□ 0.43
SGMS1-210ENST00000619438 ANK3Q12955 4377 aaKnown RBP17.71■□□□□ 0.43
SGMS1-210ENST00000619438 FAM157AC9JC47 383 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 TMEM178BH3BS89 294 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 TMEM50AO95807 157 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 GATA4P43694 442 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 GABRA2P47869 451 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 PAX9P55771 341 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 HTD2P86397 168 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 C1orf87Q8N0U7 546 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 COMMD1Q8N668 190 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 TCTEX1D1Q8N7M0 179 aa17.71■□□□□ 0.42
SGMS1-210ENST00000619438 C1orf159Q96HA4 380 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms