RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 GNRHRP30968 328 aa15.8■□□□□ 0.12
UPF3A-211ENST00000618700 FAUP35544 74 aaKnown RBP15.8■□□□□ 0.12
UPF3A-211ENST00000618700 EBI3Q14213 229 aa15.8■□□□□ 0.12
UPF3A-211ENST00000618700 ZNF57Q68EA5 555 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-211ENST00000618700 CCBE1Q6UXH8 406 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-211ENST00000618700 ZNF818PQ6ZRF7 136 aa15.8■□□□□ 0.12
UPF3A-211ENST00000618700 DRAXINQ8NBI3 349 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-211ENST00000618700 OR5AN1Q8NGI8 311 aa15.8■□□□□ 0.12
UPF3A-211ENST00000618700 TERB2Q8NHR7 220 aa15.8■□□□□ 0.12
UPF3A-211ENST00000618700 MRGPRFQ96AM1 343 aa15.8■□□□□ 0.12
UPF3A-211ENST00000618700 CHIAQ9BZP6 476 aa15.8■□□□□ 0.12
UPF3A-211ENST00000618700 DUTP33316 252 aaKnown RBP15.79■□□□□ 0.12
UPF3A-211ENST00000618700 LINC00205P59089 165 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 SCGB2B2Q4G0G5 96 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 GLDNQ6ZMI3 551 aaPredicted RBP15.79■□□□□ 0.12
UPF3A-211ENST00000618700 ZNF383Q8NA42 475 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 ZBTB34Q8NCN2 500 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 BVESQ8NE79 360 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 OR51S1Q8NGJ8 323 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 CAPSLQ8WWF8 208 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 AKR1E2Q96JD6 320 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 PRRT1Q99946 306 aa15.79■□□□□ 0.12
UPF3A-211ENST00000618700 LINC00473A8K010 186 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 IGKV1D-33P01593 117 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 IGKV1-33P01594 117 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 FAM106CPP0CH98 169 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 INPP1P49441 399 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 THBS3P49746 956 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 LY6EQ16553 131 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 Q8N6K4 173 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 OR13C8Q8NGS7 320 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 DDB2Q92466 427 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 BORCS5Q969J3 196 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 ADTRPQ96IZ2 230 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 RSRP1Q9BUV0 290 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 TNFRSF19Q9NS68 423 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 MCUBQ9NWR8 336 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 PITPNC1Q9UKF7 332 aa15.78■□□□□ 0.12
UPF3A-211ENST00000618700 LPCAT3Q6P1A2 487 aa15.77■□□□□ 0.12
UPF3A-211ENST00000618700 ZNF66Q6ZN08 573 aa15.77■□□□□ 0.12
UPF3A-211ENST00000618700 SLC38A6Q8IZM9 456 aa15.77■□□□□ 0.12
UPF3A-211ENST00000618700 EAF1Q96JC9 268 aaPredicted RBP15.77■□□□□ 0.12
UPF3A-211ENST00000618700 HSD17B10Q99714 261 aaKnown RBP15.77■□□□□ 0.12
UPF3A-211ENST00000618700 SCP2D1Q9UJQ7 156 aa15.77■□□□□ 0.12
UPF3A-211ENST00000618700 GPR31O00270 319 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 CHST1O43916 411 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 GPR137BO60478 399 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 MOSP00540 346 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 MC5RP33032 325 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 ECI1P42126 302 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 RPL30P62888 115 aaKnown RBP15.76■□□□□ 0.11
UPF3A-211ENST00000618700 SRSF2Q01130 221 aaKnown RBP15.76■□□□□ 0.11
UPF3A-211ENST00000618700 C16orf87Q6PH81 154 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 IDO2Q6ZQW0 420 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 KCTD9Q7L273 389 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 TMEM219Q86XT9 240 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 OR2T10Q8NGZ9 312 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 RBMXL1Q96E39 390 aaKnown RBP15.76■□□□□ 0.11
UPF3A-211ENST00000618700 GPHA2Q96T91 129 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 WASHC3Q9Y3C0 194 aa15.76■□□□□ 0.11
UPF3A-211ENST00000618700 ATRQ13535 2644 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 NAP1L6A6NFF2 107 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 TRIM77I1YAP6 450 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 PLA2G10O15496 165 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 TNFSF12O43508 249 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 UPK1BO75841 260 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 OR2F2O95006 317 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 APOA2P02652 100 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 PGAM2P15259 253 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 TMEM11P17152 192 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 TAGLNQ01995 201 aaKnown RBP15.75■□□□□ 0.11
UPF3A-211ENST00000618700 HES1Q14469 280 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 SURF2Q15527 256 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-211ENST00000618700 PDPNQ86YL7 162 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 MARCH1Q8TCQ1 289 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 ZFAND2BQ8WV99 257 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 ZNF486Q96H40 463 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-211ENST00000618700 RBM14Q96PK6 669 aaKnown RBP15.75■□□□□ 0.11
UPF3A-211ENST00000618700 C7orf50Q9BRJ6 194 aaKnown RBP15.75■□□□□ 0.11
UPF3A-211ENST00000618700 SLC35D1Q9NTN3 355 aa15.75■□□□□ 0.11
UPF3A-211ENST00000618700 RPL15P61313 204 aaKnown RBP15.74■□□□□ 0.11
UPF3A-211ENST00000618700 RND3P61587 244 aa15.74■□□□□ 0.11
UPF3A-211ENST00000618700 C16orf82Q7Z2V1 217 aa15.74■□□□□ 0.11
UPF3A-211ENST00000618700 CMTM1Q8IZ96 169 aa15.74■□□□□ 0.11
UPF3A-211ENST00000618700 RAB18Q9NP72 206 aa15.74■□□□□ 0.11
UPF3A-211ENST00000618700 LINC00854A0A1B0GVQ3 168 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 FAM181BA6NEQ2 426 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 PGLYRP1O75594 196 aaPredicted RBP15.73■□□□□ 0.11
UPF3A-211ENST00000618700 IGKV1-16P04430 117 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 BTCP35070 178 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 BRWD1-AS2P59051 145 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 RTL8BQ17RB0 113 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 PHLDA2Q53GA4 152 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 ZFAND1Q8TCF1 268 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 TCTEX1D2Q8WW35 142 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 SLC25A33Q9BSK2 321 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 SLC2A9Q9NRM0 540 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 GPR132Q9UNW8 380 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 PRELID3BQ9Y3B1 194 aa15.73■□□□□ 0.11
UPF3A-211ENST00000618700 H7C2Y5 167 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms