RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 DGCR2P98153 550 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 CBX3Q13185 183 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 FHL3Q13643 280 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 PSG5Q15238 335 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 C9orf66Q5T8R8 295 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 ZNF773Q6PK81 442 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 MINDY2Q8NBR6 621 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 FLYWCH2Q96CP2 140 aaKnown RBP13.15□□□□□ -0.3
LTBP4-235ENST00000617753 CENPOQ9BU64 300 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 TOLLIPQ9H0E2 274 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 SLC35D1Q9NTN3 355 aa13.15□□□□□ -0.3
LTBP4-235ENST00000617753 TRBV6-7A0A0A0MS04 114 aa13.14□□□□□ -0.31
LTBP4-235ENST00000617753 SEC14L6B5MCN3 397 aa13.14□□□□□ -0.31
LTBP4-235ENST00000617753 CA2P00918 260 aa13.14□□□□□ -0.31
LTBP4-235ENST00000617753 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
LTBP4-235ENST00000617753 CRIP2P52943 208 aaPredicted RBP13.14□□□□□ -0.31
LTBP4-235ENST00000617753 DCTN2Q13561 401 aaKnown RBP13.14□□□□□ -0.31
LTBP4-235ENST00000617753 TPRA1Q86W33 373 aa13.14□□□□□ -0.31
LTBP4-235ENST00000617753 PPP1R27Q86WC6 154 aa13.14□□□□□ -0.31
LTBP4-235ENST00000617753 OR1N2Q8NGR9 330 aa13.14□□□□□ -0.31
LTBP4-235ENST00000617753 DAPK2Q9UIK4 370 aa13.14□□□□□ -0.31
LTBP4-235ENST00000617753 RRP15Q9Y3B9 282 aaKnown RBP13.14□□□□□ -0.31
LTBP4-235ENST00000617753 SLC25A17O43808 307 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 RAMP3O60896 148 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 SCGNO76038 276 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 DTYMKP23919 212 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 CD40LGP29965 261 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 GNB1P62873 340 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 RUNX1Q01196 453 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 ZNF616Q08AN1 781 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 KIAA0141Q14154 515 aaPredicted RBP13.13□□□□□ -0.31
LTBP4-235ENST00000617753 ACTBL2Q562R1 376 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 C19orf54Q5BKX5 351 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 PYHIN1Q6K0P9 492 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 UNQ5815/PRO19632Q6UWF5 114 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 ARPC1AQ92747 370 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 FAM103A1Q9BTL3 118 aaKnown RBP13.13□□□□□ -0.31
LTBP4-235ENST00000617753 SDHAF2Q9NX18 166 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 GAB2Q9UQC2 676 aa13.13□□□□□ -0.31
LTBP4-235ENST00000617753 I3L521 148 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 SOX15O60248 233 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 TAGLNQ01995 201 aaKnown RBP13.12□□□□□ -0.31
LTBP4-235ENST00000617753 SRSF7Q16629 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
LTBP4-235ENST00000617753 RTL8BQ17RB0 113 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 CDNFQ49AH0 187 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 SFXN4Q6P4A7 337 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 ZNF562Q6V9R5 426 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 Q6ZS49 121 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 GRPEL2Q8TAA5 225 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 CASTOR1Q8WTX7 329 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 OR51E2Q9H255 320 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.12□□□□□ -0.31
LTBP4-235ENST00000617753 NUBP2Q9Y5Y2 271 aa13.12□□□□□ -0.31
LTBP4-235ENST00000617753 LOC100506127A0A0U1RQW1 187 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 CNIH1O95406 144 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 EGR2P11161 476 aaPredicted RBP13.11□□□□□ -0.31
LTBP4-235ENST00000617753 SNRPBP14678 240 aaKnown RBP13.11□□□□□ -0.31
LTBP4-235ENST00000617753 MXD1Q05195 221 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 FXYD3Q14802 87 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 ZNF260Q3ZCT1 412 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 AKIRIN2Q53H80 203 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 HACD4Q5VWC8 232 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 H1FOOQ8IZA3 346 aaPredicted RBP13.11□□□□□ -0.31
LTBP4-235ENST00000617753 LFNGQ8NES3 379 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 LGALS14Q8TCE9 139 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 HARBI1Q96MB7 349 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 ST6GALNAC5Q9BVH7 336 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 TPSG1Q9NRR2 321 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 ELF5Q9UKW6 265 aaPredicted RBP13.11□□□□□ -0.31
LTBP4-235ENST00000617753 DNAH3Q8TD57 4116 aa13.11□□□□□ -0.31
LTBP4-235ENST00000617753 TMEM235A6NFC5 223 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 SHOXO15266 292 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 SDC2P34741 201 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 ECI1P42126 302 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 LGALS7P47929 136 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 TPPP2P59282 170 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 GNG2P59768 71 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 PITPNAQ00169 270 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 CD69Q07108 199 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 NEDD8Q15843 81 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 ASPHD1Q5U4P2 390 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 BVESQ8NE79 360 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 C5orf30Q96GV9 206 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 ADTRPQ96IZ2 230 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 MS4A10Q96PG2 267 aa13.1□□□□□ -0.31
LTBP4-235ENST00000617753 ALX4Q9H161 411 aaPredicted RBP13.1□□□□□ -0.31
LTBP4-235ENST00000617753 IGKV1D-8A0A087WSZ0 117 aa13.09□□□□□ -0.31
LTBP4-235ENST00000617753 LGALS1P09382 135 aaKnown RBP13.09□□□□□ -0.31
LTBP4-235ENST00000617753 CTXN2P0C2S0 81 aa13.09□□□□□ -0.31
LTBP4-235ENST00000617753 RRASP10301 218 aa13.09□□□□□ -0.31
LTBP4-235ENST00000617753 NUDCD2Q8WVJ2 157 aa13.09□□□□□ -0.31
LTBP4-235ENST00000617753 DCSTAMPQ9H295 470 aa13.09□□□□□ -0.31
LTBP4-235ENST00000617753 SLA2Q9H6Q3 261 aa13.09□□□□□ -0.31
LTBP4-235ENST00000617753 ZNF355PQ9NSJ1 428 aa13.09□□□□□ -0.31
LTBP4-235ENST00000617753 RHBDL2Q9NX52 303 aa13.09□□□□□ -0.31
LTBP4-235ENST00000617753 LINC01619G3V211 115 aa13.08□□□□□ -0.32
LTBP4-235ENST00000617753 J3QRK9 145 aa13.08□□□□□ -0.32
LTBP4-235ENST00000617753 OVOL1O14753 267 aa13.08□□□□□ -0.32
LTBP4-235ENST00000617753 IGLV2-23P01705 113 aa13.08□□□□□ -0.32
LTBP4-235ENST00000617753 IGHV3-11P01762 117 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms