RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 DLX4Q92988 240 aaPredicted RBP17.17■□□□□ 0.34
NEDD4L-237ENST00000617539 ZNF230Q9UIE0 474 aaPredicted RBP17.17■□□□□ 0.34
NEDD4L-237ENST00000617539 BLOC1S6Q9UL45 172 aa17.17■□□□□ 0.34
NEDD4L-237ENST00000617539 ZNF256Q9Y2P7 627 aaPredicted RBP17.17■□□□□ 0.34
NEDD4L-237ENST00000617539 IGHV4OR15-8A0A075B7B6 117 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 A0A087WW49 117 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 TRBV6-7A0A0A0MS04 114 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 TRDV1A0A1B0GX56 115 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 PDCD5O14737 125 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 ARPC1BO15143 372 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 BET1O15155 118 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 LGALS1P09382 135 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 SERPINB10P48595 397 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 RPS16P62249 146 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 AKIRIN2Q53H80 203 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 ACTBL2Q562R1 376 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 UNQ5815/PRO19632Q6UWF5 114 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 LFNGQ8NES3 379 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 TSNAXQ99598 290 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 OR2D2Q9H210 308 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 RAB26Q9ULW5 256 aa17.16■□□□□ 0.34
NEDD4L-237ENST00000617539 OVOL1O14753 267 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 SLC25A17O43808 307 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 IGLV2-23P01705 113 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 OR8U9P0C7N5 309 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 HIST1H1DP16402 221 aaKnown RBP17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 RAB6AP20340 208 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 RANBP1P43487 201 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 INSL3P51460 131 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 TMEM267Q0VDI3 215 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 C22orf42Q6IC83 251 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 SLC35D1Q9NTN3 355 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 SDHAF2Q9NX18 166 aa17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 ELF5Q9UKW6 265 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-237ENST00000617539 A0A075B6Q4 140 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 SMIM30A4D0T7 59 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 IGHV3-11P01762 117 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 APOA2P02652 100 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 CRYGBP07316 175 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 RAB3BP20337 219 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 MYL9P24844 172 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 PJVKQ0ZLH3 352 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 PYHIN1Q6K0P9 492 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 ARPC1AQ92747 370 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 FLYWCH2Q96CP2 140 aaKnown RBP17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 MS4A10Q96PG2 267 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 SORL1Q92673 2214 aa17.14■□□□□ 0.33
NEDD4L-237ENST00000617539 IGKV1D-8A0A087WSZ0 117 aa17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 LINC01619G3V211 115 aa17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 DIRAS3O95661 229 aa17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 GALP22466 123 aa17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 GABARAPL2P60520 117 aa17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 MRPS15P82914 257 aaKnown RBP17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 OR10J5Q8NHC4 309 aa17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 GRPEL2Q8TAA5 225 aa17.13■□□□□ 0.33
NEDD4L-237ENST00000617539 STAB2Q8WWQ8 2551 aa17.12■□□□□ 0.33
NEDD4L-237ENST00000617539 GADD45AP24522 165 aa17.12■□□□□ 0.33
NEDD4L-237ENST00000617539 TPPP2P59282 170 aa17.12■□□□□ 0.33
NEDD4L-237ENST00000617539 FXYD3Q14802 87 aa17.12■□□□□ 0.33
NEDD4L-237ENST00000617539 UBE2UQ5VVX9 321 aa17.12■□□□□ 0.33
NEDD4L-237ENST00000617539 ZNF429Q86V71 674 aa17.12■□□□□ 0.33
NEDD4L-237ENST00000617539 RHOVQ96L33 236 aa17.12■□□□□ 0.33
NEDD4L-237ENST00000617539 WWC2-AS2Q96NR7 200 aa17.12■□□□□ 0.33
NEDD4L-237ENST00000617539 MRGPRG-AS1Q2M3A8 158 aa17.11■□□□□ 0.33
NEDD4L-237ENST00000617539 Q6ZS49 121 aa17.11■□□□□ 0.33
NEDD4L-237ENST00000617539 SPARTQ8N0X7 666 aa17.11■□□□□ 0.33
NEDD4L-237ENST00000617539 RYR3Q15413 4870 aa17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 SRRM4A7MD48 611 aaKnown RBP17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 SAP30O75446 220 aa17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 NHLRC4P0CG21 123 aaPredicted RBP17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 SRSF7Q16629 238 aaKnown RBP eCLIP17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 ACSM6Q6P461 480 aa17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 H1FOOQ8IZA3 346 aaPredicted RBP17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 DDB2Q92466 427 aa17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 HARBI1Q96MB7 349 aa17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 SLA2Q9H6Q3 261 aa17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 TXNL4BQ9NX01 149 aaKnown RBP17.1■□□□□ 0.33
NEDD4L-237ENST00000617539 MRPS14O60783 128 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 ATP6V1G2O95670 118 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 LY86O95711 162 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 TRGV3P03979 118 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 ARFRP1Q13795 201 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 TMEM177Q53S58 311 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 BVESQ8NE79 360 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 OR5T1Q8NG75 326 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 ASCL2Q99929 193 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 ATG5Q9H1Y0 275 aa17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.09■□□□□ 0.33
NEDD4L-237ENST00000617539 METTL21EPA6NDL7 271 aa17.08■□□□□ 0.32
NEDD4L-237ENST00000617539 HSPB1P04792 205 aaKnown RBP17.08■□□□□ 0.32
NEDD4L-237ENST00000617539 SPNP16150 400 aa17.08■□□□□ 0.32
NEDD4L-237ENST00000617539 FGF9P31371 208 aaPredicted RBP17.08■□□□□ 0.32
NEDD4L-237ENST00000617539 LGALS7P47929 136 aa17.08■□□□□ 0.32
NEDD4L-237ENST00000617539 POC5Q8NA72 575 aa17.08■□□□□ 0.32
NEDD4L-237ENST00000617539 GINS4Q9BRT9 223 aa17.08■□□□□ 0.32
NEDD4L-237ENST00000617539 U3KQK5 164 aa17.08■□□□□ 0.32
NEDD4L-237ENST00000617539 HUWE1Q7Z6Z7 4374 aaKnown RBP17.07■□□□□ 0.32
NEDD4L-237ENST00000617539 TNCP24821 2201 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms