RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ANGPTL4Q9BY76 406 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 MRPL16Q9NX20 251 aaKnown RBP10.96□□□□□ -0.66
TCF4-248ENST00000616053 TRAV9-2A0A087WT02 112 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 MESTQ5EB52 335 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 FAM166AQ6J272 317 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 LINC00596Q86U02 117 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 NDUFS5O43920 106 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 PRO1933Q9H354 126 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 NTN1O95631 604 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 IGSF11Q5DX21 431 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 FAM57AQ8TBR7 257 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 DUSP15Q9H1R2 295 aaPredicted RBP10.95□□□□□ -0.66
TCF4-248ENST00000616053 OR10J1P30954 320 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 ELOVL5Q9NYP7 299 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 TMEM272A0A1B0GTI8 110 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 CALYQ9NYX4 217 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 CLPSL1A2RUU4 121 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 C1QTNF9BB2RNN3 333 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 POC1AQ8NBT0 407 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 IDI2-AS1Q9NZ38 188 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 MYO16Q9Y6X6 1858 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 NUBPLQ8TB37 319 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 GPR132Q9UNW8 380 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 TEX48A0A1B0GUV7 120 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 PLPP3O14495 311 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 CLDND2Q8NHS1 167 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 MRAPQ8TCY5 172 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 SLC25A37Q9NYZ2 338 aa10.95□□□□□ -0.66
TCF4-248ENST00000616053 CASP8AP2Q9UKL3 1982 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 GATA4P43694 442 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 LRTM2Q8N967 370 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 NPVFQ9HCQ7 196 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 SPTA1P02549 2419 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 ZNF880Q6PDB4 577 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 CLEC19AQ6UXS0 136 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 SPOCK3Q9BQ16 436 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 ZNF430Q9H8G1 570 aaPredicted RBP10.94□□□□□ -0.66
TCF4-248ENST00000616053 TSPO2Q5TGU0 170 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 PPP1R27Q86WC6 154 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 FDCSPQ8NFU4 85 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 CD7P09564 240 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 SP9P0CG40 484 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 HMGA1P17096 107 aaKnown RBP10.94□□□□□ -0.66
TCF4-248ENST00000616053 MPV17P39210 176 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 OR5A1Q8NGJ0 315 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 ISG20L2Q9H9L3 353 aaKnown RBP10.94□□□□□ -0.66
TCF4-248ENST00000616053 TBX21Q9UL17 535 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 C11orf87Q6NUJ2 197 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 OR11H4Q8NGC9 324 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 AURKAIP1Q9NWT8 199 aaPredicted RBP10.94□□□□□ -0.66
TCF4-248ENST00000616053 KCNE5Q9UJ90 142 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 MPV17LQ2QL34 196 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 OR9G1Q8NH87 305 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 WNT2BQ93097 391 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 TMEM54Q969K7 222 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 TMEM45BQ96B21 275 aa10.94□□□□□ -0.66
TCF4-248ENST00000616053 YLPM1P49750 1951 aaKnown RBP10.94□□□□□ -0.66
TCF4-248ENST00000616053 MBPP02686 304 aaPredicted RBP10.93□□□□□ -0.66
TCF4-248ENST00000616053 HOXD13P35453 343 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 ACSF3Q4G176 576 aaPredicted RBP10.93□□□□□ -0.66
TCF4-248ENST00000616053 CCL28Q9NRJ3 127 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 CELF2-AS1Q8N7Q2 184 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 MS4A6AQ9H2W1 248 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 SFT2D2O95562 160 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 POLR2IP36954 125 aaKnown RBP10.93□□□□□ -0.66
TCF4-248ENST00000616053 SCGB3A1Q96QR1 104 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 PAM16Q9Y3D7 125 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 CAMTA1Q9Y6Y1 1673 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
TCF4-248ENST00000616053 CDKN1AP38936 164 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 WDR38Q5JTN6 314 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 QTRT1Q9BXR0 403 aaKnown RBP10.93□□□□□ -0.66
TCF4-248ENST00000616053 HS3ST3B1Q9Y662 390 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 KBTBD11-OT1A0A1B0GTJ5 212 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 CA11O75493 328 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 PAX1P15863 534 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 GLMPQ8WWB7 406 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 TMEM127O75204 238 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 GPR183P32249 361 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 RBMY1FQ15415 496 aaKnown RBP10.93□□□□□ -0.66
TCF4-248ENST00000616053 AANATQ16613 207 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 C10orf111Q8N326 155 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 GATD1Q8NB37 220 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 TRAV8-6A0A0B4J262 113 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 TOMM40O96008 361 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 PAX2Q02962 417 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 FBXL7Q9UJT9 491 aa10.93□□□□□ -0.66
TCF4-248ENST00000616053 TCRBV3S1A0A5B6 114 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 ETHE1O95571 254 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 TGIF1Q15583 401 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 SMRP1Q8NCR6 262 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 GSX2Q9BZM3 304 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 OR11H12B2RN74 326 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 M0QZK8 103 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 PNRC1Q12796 327 aaPredicted RBP10.92□□□□□ -0.66
TCF4-248ENST00000616053 UNC119Q13432 240 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 OR11H1Q8NG94 326 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 OR11H2Q8NH07 326 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 PLAC1Q9HBJ0 212 aa10.92□□□□□ -0.66
TCF4-248ENST00000616053 SMIM13P0DJ93 91 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms