RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 IGSF11Q5DX21 431 aa17.65■□□□□ 0.42
FAM228B-208ENST00000613899 VAX1Q5SQQ9 334 aa17.65■□□□□ 0.42
FAM228B-208ENST00000613899 ZNF562Q6V9R5 426 aa17.65■□□□□ 0.42
FAM228B-208ENST00000613899 PPP1R27Q86WC6 154 aa17.65■□□□□ 0.42
FAM228B-208ENST00000613899 FLYWCH2Q96CP2 140 aaKnown RBP17.65■□□□□ 0.42
FAM228B-208ENST00000613899 CLCC1Q96S66 551 aa17.65■□□□□ 0.42
FAM228B-208ENST00000613899 SLC35D1Q9NTN3 355 aa17.65■□□□□ 0.42
FAM228B-208ENST00000613899 TRBV6-7A0A0A0MS04 114 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 CA2P00918 260 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 GSTT2P0CG29 244 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 GSTT2BP0CG30 244 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 PSMB9P28065 219 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 INSL3P51460 131 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 ARFRP1Q13795 201 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 ZNF260Q3ZCT1 412 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 AKIRIN2Q53H80 203 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 ACTBL2Q562R1 376 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 ASPHD1Q5U4P2 390 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 UNQ5815/PRO19632Q6UWF5 114 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 GAB2Q9UQC2 676 aa17.64■□□□□ 0.41
FAM228B-208ENST00000613899 A0A0B4J203 849 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 OR8U9P0C7N5 309 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 EGR2P11161 476 aaPredicted RBP17.63■□□□□ 0.41
FAM228B-208ENST00000613899 CD40LGP29965 261 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 FGF9P31371 208 aaPredicted RBP17.63■□□□□ 0.41
FAM228B-208ENST00000613899 TALDO1P37837 337 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 LINC00205P59089 165 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 CBX3Q13185 183 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 SRSF7Q16629 238 aaKnown RBP eCLIP17.63■□□□□ 0.41
FAM228B-208ENST00000613899 SPARTQ8N0X7 666 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 ARPC1AQ92747 370 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 GINS4Q9BRT9 223 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 FAM103A1Q9BTL3 118 aaKnown RBP17.63■□□□□ 0.41
FAM228B-208ENST00000613899 SCOCQ9UIL1 159 aa17.63■□□□□ 0.41
FAM228B-208ENST00000613899 COL7A1Q02388 2944 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 SLC25A17O43808 307 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 LGALS1P09382 135 aaKnown RBP17.62■□□□□ 0.41
FAM228B-208ENST00000613899 ECI1P42126 302 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 TAGLNQ01995 201 aaKnown RBP17.62■□□□□ 0.41
FAM228B-208ENST00000613899 Q6ZS49 121 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 NR2C2APQ86WQ0 139 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 MAFIPQ8WZ33 124 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 ATG5Q9H1Y0 275 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 SLA2Q9H6Q3 261 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 TXNL4BQ9NX01 149 aaKnown RBP17.62■□□□□ 0.41
FAM228B-208ENST00000613899 SDHAF2Q9NX18 166 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 ZNF230Q9UIE0 474 aaPredicted RBP17.62■□□□□ 0.41
FAM228B-208ENST00000613899 STUB1Q9UNE7 303 aa17.62■□□□□ 0.41
FAM228B-208ENST00000613899 RBM7Q9Y580 266 aaKnown RBP17.62■□□□□ 0.41
FAM228B-208ENST00000613899 NOTOA8MTQ0 251 aa17.61■□□□□ 0.41
FAM228B-208ENST00000613899 LGALS7P47929 136 aa17.61■□□□□ 0.41
FAM228B-208ENST00000613899 C11orf87Q6NUJ2 197 aa17.61■□□□□ 0.41
FAM228B-208ENST00000613899 LFNGQ8NES3 379 aa17.61■□□□□ 0.41
FAM228B-208ENST00000613899 CASTOR1Q8WTX7 329 aa17.61■□□□□ 0.41
FAM228B-208ENST00000613899 YTHDF1Q9BYJ9 559 aaKnown RBP17.61■□□□□ 0.41
FAM228B-208ENST00000613899 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.61■□□□□ 0.41
FAM228B-208ENST00000613899 TPSG1Q9NRR2 321 aa17.61■□□□□ 0.41
FAM228B-208ENST00000613899 LINC01619G3V211 115 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 OVOL1O14753 267 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 DTYMKP23919 212 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 FXYD3Q14802 87 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 RTL8BQ17RB0 113 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 TPRA1Q86W33 373 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 GRPEL2Q8TAA5 225 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 DCUN1D4Q92564 292 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 HARBI1Q96MB7 349 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 PRR25Q96S07 402 aa17.6■□□□□ 0.41
FAM228B-208ENST00000613899 ALX4Q9H161 411 aaPredicted RBP17.6■□□□□ 0.41
FAM228B-208ENST00000613899 ZNF256Q9Y2P7 627 aaPredicted RBP17.6■□□□□ 0.41
FAM228B-208ENST00000613899 SMIM30A4D0T7 59 aa17.59■□□□□ 0.41
FAM228B-208ENST00000613899 SCGNO76038 276 aa17.59■□□□□ 0.41
FAM228B-208ENST00000613899 TPPP2P59282 170 aa17.59■□□□□ 0.41
FAM228B-208ENST00000613899 ZNF429Q86V71 674 aa17.59■□□□□ 0.41
FAM228B-208ENST00000613899 SSR3Q9UNL2 185 aa17.59■□□□□ 0.41
FAM228B-208ENST00000613899 IGLV2-23P01705 113 aa17.58■□□□□ 0.4
FAM228B-208ENST00000613899 RRASP10301 218 aa17.58■□□□□ 0.4
FAM228B-208ENST00000613899 H1FOOQ8IZA3 346 aaPredicted RBP17.58■□□□□ 0.4
FAM228B-208ENST00000613899 ADTRPQ96IZ2 230 aa17.58■□□□□ 0.4
FAM228B-208ENST00000613899 LSM4Q9Y4Z0 139 aaKnown RBP17.58■□□□□ 0.4
FAM228B-208ENST00000613899 H3BUA1 57 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 SHOXO15266 292 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 CNIH1O95406 144 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 SLURP1P55000 103 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 CDNFQ49AH0 187 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 TMEM177Q53S58 311 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 DLX4Q92988 240 aaPredicted RBP17.57■□□□□ 0.4
FAM228B-208ENST00000613899 C5orf30Q96GV9 206 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 MS4A10Q96PG2 267 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 DAPK2Q9UIK4 370 aa17.57■□□□□ 0.4
FAM228B-208ENST00000613899 IGHV4OR15-8A0A075B7B6 117 aa17.56■□□□□ 0.4
FAM228B-208ENST00000613899 A0A087WW49 117 aa17.56■□□□□ 0.4
FAM228B-208ENST00000613899 ARPC1BO15143 372 aaKnown RBP17.56■□□□□ 0.4
FAM228B-208ENST00000613899 IGHV3-11P01762 117 aa17.56■□□□□ 0.4
FAM228B-208ENST00000613899 TRGV3P03979 118 aa17.56■□□□□ 0.4
FAM228B-208ENST00000613899 SNRPBP14678 240 aaKnown RBP17.56■□□□□ 0.4
FAM228B-208ENST00000613899 PITPNAQ00169 270 aa17.56■□□□□ 0.4
FAM228B-208ENST00000613899 HACD4Q5VWC8 232 aa17.56■□□□□ 0.4
FAM228B-208ENST00000613899 SFXN4Q6P4A7 337 aa17.56■□□□□ 0.4
FAM228B-208ENST00000613899 ZNF773Q6PK81 442 aa17.56■□□□□ 0.4
FAM228B-208ENST00000613899 POC5Q8NA72 575 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms