RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 HES3Q5TGS1 186 aa5.95□□□□□ -1.46
CLCN3-211ENST00000613795 OR2K2Q8NGT1 345 aa5.95□□□□□ -1.46
CLCN3-211ENST00000613795 LRRC29Q8WV35 223 aa5.95□□□□□ -1.46
CLCN3-211ENST00000613795 PRSS27Q9BQR3 290 aa5.95□□□□□ -1.46
CLCN3-211ENST00000613795 PAXXQ9BUH6 204 aa5.95□□□□□ -1.46
CLCN3-211ENST00000613795 RBBP6Q7Z6E9 1792 aaKnown RBP5.95□□□□□ -1.46
CLCN3-211ENST00000613795 LY75O60449 1722 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 MSGN1A6NI15 193 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 MPZL1O95297 269 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 RBP4P02753 201 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 UMODP07911 640 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 RND1Q92730 232 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 A8MWP6 167 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 BGLAPP02818 100 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 ERGP11308 486 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 DMRTC1Q5HYR2 192 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 DEFB108BQ8NET1 73 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 OR1B1Q8NGR6 318 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 OR1N2Q8NGR9 330 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 COPS9Q8WXC6 57 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 SNRNP40Q96DI7 357 aaKnown RBP5.94□□□□□ -1.46
CLCN3-211ENST00000613795 TMEM140Q9NV12 185 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 FOXD3Q9UJU5 478 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-211ENST00000613795 WNK3Q9BYP7 1800 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 SERF1AO75920 110 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 SLC35B1P78383 322 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 TM4SF20Q53R12 229 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 OR52M1Q8NGK5 317 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 SFXN3Q9BWM7 321 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 WNT5BQ9H1J7 359 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 MAP1LC3AQ9H492 121 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 LRRC37AA6NMS7 1700 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 ORM2P19652 201 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 IGFBP6P24592 240 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-211ENST00000613795 OTX1P32242 354 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-211ENST00000613795 HBBP68871 147 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 ICAM4Q14773 271 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 RFLNBQ8N5W9 214 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 SMRP1Q8NCR6 262 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 ABHD3Q8WU67 409 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 RNF7Q9UBF6 113 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 SHISA3A0PJX4 238 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 C7orf71A4D174 169 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 J3QT63 122 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 CA7P43166 264 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 RPS20P60866 119 aaKnown RBP5.94□□□□□ -1.46
CLCN3-211ENST00000613795 SPEM2Q0P670 501 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 MMDQ15546 238 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 CXorf66Q5JRM2 361 aaPredicted RBP5.94□□□□□ -1.46
CLCN3-211ENST00000613795 CCDC144NLQ6NUI1 221 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 RASL10BQ96S79 203 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 MS4A6AQ9H2W1 248 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 MS4A5Q9H3V2 200 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 SERGEFQ9UGK8 458 aa5.94□□□□□ -1.46
CLCN3-211ENST00000613795 CA6P23280 308 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 MPZP25189 248 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 TFPI2P48307 235 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 KHDC1LQ5JSQ8 128 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 TCF23Q7RTU1 214 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 RCC1LQ96I51 464 aaKnown RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 UFC1Q9Y3C8 167 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 F11RQ9Y624 299 aaKnown RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 SHROOM3Q8TF72 1996 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 A0A0U1RQV5 110 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 ZNF716A6NP11 495 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 K7ESF4 209 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 CDX4O14627 284 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 OR4A8P0C604 315 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 ZNF83P51522 516 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 RBM11P57052 281 aaKnown RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 ZXDAP98168 799 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 DEFB124Q8NES8 71 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 OR1K1Q8NGR3 316 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 ZNF414Q96IQ9 312 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 OR2H1Q9GZK4 316 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 SCN9AQ15858 1988 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 LOC389332A0A1B0GUA5 103 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 TNFRSF6BO95407 300 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 TBX6O95947 436 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 ASAH2BP0C7U1 165 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 LIFP15018 202 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 RPL23P62829 140 aaKnown RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 ADIPOQQ15848 244 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 KIAA1644Q3SXP7 199 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 ZFAND6Q6FIF0 208 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 CLEC2AQ6UVW9 174 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 GPR146Q96CH1 333 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 MRPL16Q9NX20 251 aaKnown RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 NTN1O95631 604 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 LY6G6FQ5SQ64 297 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 SLC23A3Q6PIS1 610 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 FLYWCH2Q96CP2 140 aaKnown RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 FNDC4Q9H6D8 234 aaPredicted RBP5.93□□□□□ -1.46
CLCN3-211ENST00000613795 IL36RNQ9UBH0 155 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 TUBGCP6Q96RT7 1819 aa5.93□□□□□ -1.46
CLCN3-211ENST00000613795 IGHV5-10-1A0A0J9YXX1 117 aa5.92□□□□□ -1.46
CLCN3-211ENST00000613795 A0A1W2PR80 420 aa5.92□□□□□ -1.46
CLCN3-211ENST00000613795 ZNF324O75467 553 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-211ENST00000613795 CKS2P33552 79 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms