RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 THOC3Q96J01 351 aaKnown RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 MBNL3Q9NUK0 354 aaKnown RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 MRPS18CQ9Y3D5 142 aaKnown RBP12.7□□□□□ -0.38
PCDHGB1-202ENST00000611598 NBEAQ8NFP9 2946 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 ARR3P36575 388 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 ATP5G3P48201 142 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 ZXDAP98168 799 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 BTNL3Q6UXE8 466 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 LINC01551Q86U37 167 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 SCCPDHQ8NBX0 429 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 ZNF114Q8NC26 417 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 DTD1Q8TEA8 209 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 C17orf98A8MV24 154 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 CDIPTO14735 213 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 MLNRO43193 412 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 MBP02144 154 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 C1QTNF9P0C862 333 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 RPL15P61313 204 aaKnown RBP12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 GNB1P62873 340 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 IQCJQ1A5X6 159 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 WDYHV1Q96HA8 205 aa12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 ZNF703Q9H7S9 590 aaPredicted RBP12.69□□□□□ -0.38
PCDHGB1-202ENST00000611598 TRAV38-1A0A0B4J264 116 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 A0A0U1RQK1 487 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 ZNF320A2RRD8 509 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 VENTXO95231 258 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 SYNGR4O95473 234 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 SCGB1D1O95968 90 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 OR3A1P47881 315 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 TMPRSS7Q7RTY8 843 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 ZNF645Q8N7E2 425 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 OR52L2PQ8NGH6 319 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 PILRBQ9UKJ0 227 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 BOKQ9UMX3 212 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 RNF212BA8MTL3 300 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 PSPNO60542 156 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 NXPH2O95156 264 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 GCH1P30793 250 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 MAGEA5P43359 124 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 CDC34P49427 236 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 CASP6P55212 293 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 ERVK11-1P61568 191 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 ATP6V1FQ16864 119 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 KCNIP4Q6PIL6 250 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 TCF23Q7RTU1 214 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 Q8N7P7 452 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 C12orf49Q9H741 205 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 POLR3KQ9Y2Y1 108 aaPredicted RBP12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 WIPI2Q9Y4P8 454 aa12.68□□□□□ -0.38
PCDHGB1-202ENST00000611598 NDUFB4O95168 129 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 PDGFBP01127 241 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 TFF1P04155 84 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 CCKARP32238 428 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 MSMO1Q15800 293 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 ZNF709Q8N972 641 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 OR2M7Q8NG81 312 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 FKBP11Q9NYL4 201 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 TRAPPC1Q9Y5R8 145 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 RBFOX2O43251 390 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 RBMXL2O75526 392 aaKnown RBP12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 CD33P20138 364 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 G0S2P27469 103 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 PPP1CBP62140 327 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 CST9LP1Q5W188 147 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 TMEM144Q7Z5S9 345 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 AHCTF1Q8WYP5 2266 aa12.67□□□□□ -0.38
PCDHGB1-202ENST00000611598 MUC3AQ02505 3323 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 C12orf77C9JDV5 145 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 NEURL1O76050 574 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 EIF4EBP1Q13541 118 aaPredicted RBP12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 TIPARPQ7Z3E1 657 aaKnown RBP12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 MDP1Q86V88 176 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 LRP11Q86VZ4 500 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 TMEM204Q9BSN7 226 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 RTL8AQ9BWD3 113 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 SERPINA7P05543 415 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 CELA3BP08861 270 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 RAB4BP61018 213 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 LCN2P80188 198 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 VWC2Q2TAL6 325 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 CT55Q8WUE5 264 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 PXMP4Q9Y6I8 212 aa12.66□□□□□ -0.38
PCDHGB1-202ENST00000611598 URB1O60287 2271 aaKnown RBP12.65□□□□□ -0.38
PCDHGB1-202ENST00000611598 TRBV20OR9-2A0A075B6H5 130 aa12.65□□□□□ -0.38
PCDHGB1-202ENST00000611598 SOX15O60248 233 aa12.65□□□□□ -0.38
PCDHGB1-202ENST00000611598 CD82P27701 267 aa12.65□□□□□ -0.38
PCDHGB1-202ENST00000611598 PMS2CLQ68D20 193 aa12.65□□□□□ -0.38
PCDHGB1-202ENST00000611598 GP6Q9HCN6 339 aa12.65□□□□□ -0.38
PCDHGB1-202ENST00000611598 SH2D1BO14796 132 aa12.65□□□□□ -0.39
PCDHGB1-202ENST00000611598 GRPP07492 148 aa12.65□□□□□ -0.39
PCDHGB1-202ENST00000611598 RAC2P15153 192 aa12.65□□□□□ -0.39
PCDHGB1-202ENST00000611598 HNF1AP20823 631 aa12.65□□□□□ -0.39
PCDHGB1-202ENST00000611598 EDDM3BP56851 147 aa12.65□□□□□ -0.39
PCDHGB1-202ENST00000611598 ERVFC1-1P60608 527 aa12.65□□□□□ -0.39
PCDHGB1-202ENST00000611598 TRA2AQ13595 282 aaKnown RBP eCLIP12.65□□□□□ -0.39
PCDHGB1-202ENST00000611598 ZNF146Q15072 292 aa12.65□□□□□ -0.39
PCDHGB1-202ENST00000611598 GALMQ96C23 342 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms