RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 RPS19P39019 145 aaKnown RBP9.07□□□□□ -0.96
CCDC12-209ENST00000604164 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
CCDC12-209ENST00000604164 LSM3P62310 102 aaKnown RBP9.07□□□□□ -0.96
CCDC12-209ENST00000604164 CFHR3Q02985 330 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 PDLIM3Q53GG5 364 aaPredicted RBP9.07□□□□□ -0.96
CCDC12-209ENST00000604164 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
CCDC12-209ENST00000604164 PYHIN1Q6K0P9 492 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 ZNF562Q6V9R5 426 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 ZNF645Q8N7E2 425 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 ABHD5Q8WTS1 349 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 SLC25A46Q96AG3 418 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 RITA1Q96K30 269 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 FUNDC2Q9BWH2 189 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 FBXL15Q9H469 300 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 ZMAT5Q9UDW3 170 aaKnown RBP9.07□□□□□ -0.96
CCDC12-209ENST00000604164 ELF5Q9UKW6 265 aaPredicted RBP9.07□□□□□ -0.96
CCDC12-209ENST00000604164 PRELID3BQ9Y3B1 194 aa9.07□□□□□ -0.96
CCDC12-209ENST00000604164 SMIM31A0A1B0GVY4 71 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 G3V4G9 280 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 CREBL2O60519 120 aaPredicted RBP9.06□□□□□ -0.96
CCDC12-209ENST00000604164 PROP1O75360 226 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 IGKV1-16P04430 117 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 PSMB8P28062 276 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 CRIP2P52943 208 aaPredicted RBP9.06□□□□□ -0.96
CCDC12-209ENST00000604164 CX3CL1P78423 397 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 PSG5Q15238 335 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 BEAN1Q3B7T3 259 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 TMEM69Q5SWH9 247 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 HOGA1Q86XE5 327 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 C1QL4Q86Z23 238 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 BEST4Q8NFU0 473 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 OR13F1Q8NGS4 319 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 C4orf3Q8WVX3 66 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 ACOT12Q8WYK0 555 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 DPF1Q92782 380 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 HARBI1Q96MB7 349 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 CMTM3Q96MX0 182 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 AUNIPQ9H7T9 357 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 IFT46Q9NQC8 304 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 NECAP2Q9NVZ3 263 aa9.06□□□□□ -0.96
CCDC12-209ENST00000604164 MRPS7Q9Y2R9 242 aaKnown RBP9.06□□□□□ -0.96
CCDC12-209ENST00000604164 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 CCL24O00175 119 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 SHOXO15266 292 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 SSX5O60225 188 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 HLA-DQB1P01920 261 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 RPLP1P05386 114 aaKnown RBP9.05□□□□□ -0.96
CCDC12-209ENST00000604164 RORCP51449 518 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 MSMO1Q15800 293 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 VMA21Q3ZAQ7 101 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 TMEM177Q53S58 311 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 C8orf86Q6ZUL3 223 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 PPP1R27Q86WC6 154 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 SAMD12Q8N8I0 201 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 MINDY2Q8NBR6 621 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 OR5M8Q8NGP6 311 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 OSR1Q8TAX0 266 aaPredicted RBP9.05□□□□□ -0.96
CCDC12-209ENST00000604164 AP3S1Q92572 193 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 BORCS5Q969J3 196 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 UBE2E2Q96LR5 201 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 TMEM68Q96MH6 324 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 HSD17B10Q99714 261 aaKnown RBP9.05□□□□□ -0.96
CCDC12-209ENST00000604164 MRPS26Q9BYN8 205 aaKnown RBP9.05□□□□□ -0.96
CCDC12-209ENST00000604164 FOXA2Q9Y261 457 aaPredicted RBP9.05□□□□□ -0.96
CCDC12-209ENST00000604164 WSB1Q9Y6I7 421 aa9.05□□□□□ -0.96
CCDC12-209ENST00000604164 G3V318 75 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 WIPF1O43516 503 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 SLC25A17O43808 307 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 CNIH1O95406 144 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 IGLV1-40P01703 118 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 NFYAP23511 347 aaPredicted RBP9.04□□□□□ -0.96
CCDC12-209ENST00000604164 PPIFP30405 207 aaKnown RBP9.04□□□□□ -0.96
CCDC12-209ENST00000604164 DUTP33316 252 aaKnown RBP9.04□□□□□ -0.96
CCDC12-209ENST00000604164 ECSCRQ19T08 205 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 AKIRIN2Q53H80 203 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 OXLD1Q5BKU9 147 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 MZT2AQ6P582 158 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 ANKRD13BQ86YJ7 626 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 MRPL41Q8IXM3 137 aaKnown RBP9.04□□□□□ -0.96
CCDC12-209ENST00000604164 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 TEX45Q8NA69 505 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 BVESQ8NE79 360 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 ARPC1AQ92747 370 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 CLCC1Q96S66 551 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 VSIG4Q9Y279 399 aa9.04□□□□□ -0.96
CCDC12-209ENST00000604164 RBMX2Q9Y388 322 aaKnown RBP9.04□□□□□ -0.96
CCDC12-209ENST00000604164 A0A1W2PN81 502 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 PLXNB1O43157 2135 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 TUSC2O75896 110 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 CA2P00918 260 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 APOA1P02647 267 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 IGLL1P15814 213 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 CHRNA7P36544 502 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 TGFBR1P36897 503 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 KIR2DS2P43631 304 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 RAB9AP51151 201 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 TAS2R46P59540 309 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 VBP1P61758 197 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 NCS1P62166 190 aa9.03□□□□□ -0.96
CCDC12-209ENST00000604164 FXYD3Q14802 87 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms