RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ST6GALNAC6Q969X2 333 aa18.36■□□□□ 0.53
IRF3-228ENST00000601291 ST6GAL2Q96JF0 529 aa18.36■□□□□ 0.53
IRF3-228ENST00000601291 PDCD10Q9BUL8 212 aa18.36■□□□□ 0.53
IRF3-228ENST00000601291 APCP25054 2843 aa18.36■□□□□ 0.53
IRF3-228ENST00000601291 NAV2Q8IVL1 2488 aa18.36■□□□□ 0.53
IRF3-228ENST00000601291 C5orf51A6NDU8 294 aa18.35■□□□□ 0.53
IRF3-228ENST00000601291 ODF3BA8MYP8 253 aa18.35■□□□□ 0.53
IRF3-228ENST00000601291 SIX6O95475 246 aa18.35■□□□□ 0.53
IRF3-228ENST00000601291 GIPP09681 153 aaPredicted RBP18.35■□□□□ 0.53
IRF3-228ENST00000601291 HCP5Q6MZN7 132 aa18.35■□□□□ 0.53
IRF3-228ENST00000601291 CHIAQ9BZP6 476 aa18.35■□□□□ 0.53
IRF3-228ENST00000601291 TMED3Q9Y3Q3 217 aa18.35■□□□□ 0.53
IRF3-228ENST00000601291 POLQO75417 2590 aa18.35■□□□□ 0.53
IRF3-228ENST00000601291 FASNP49327 2511 aaKnown RBP18.35■□□□□ 0.53
IRF3-228ENST00000601291 C13orf42A0A1B0GVH6 325 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 RNASEK-C17orf49H0YIS7 233 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 RBFOX2O43251 390 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■□□□□ 9.8
IRF3-228ENST00000601291 TXNL1O43396 289 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 FCGR3BO75015 233 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 HTR1DP28221 377 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 CEACAM3P40198 252 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 LPAR6P43657 344 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 H2BFSP57053 126 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 LINC00205P59089 165 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 ZNF585BQ52M93 769 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 LYZL2Q7Z4W2 148 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 ZNF383Q8NA42 475 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 DDB2Q92466 427 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 MRPL20Q9BYC9 149 aaKnown RBP18.34■□□□□ 0.53
IRF3-228ENST00000601291 HIF1ANQ9NWT6 349 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 LEUTXA8MZ59 168 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 RAMP3O60896 148 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 ATG12O94817 140 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 CT45A6P0DMU7 189 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 CT45A5P0DMU8 189 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 CT45A7P0DMV0 189 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 REG1BP48304 166 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 TAGLNQ01995 201 aaKnown RBP18.34■□□□□ 0.53
IRF3-228ENST00000601291 ZNF816Q0VGE8 651 aaPredicted RBP18.34■□□□□ 0.53
IRF3-228ENST00000601291 GGNBP1Q5YKI7 109 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 OR4S2Q8NH73 311 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 LHX4Q969G2 390 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 RPEQ96AT9 228 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 PPP1R14BQ96C90 147 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 AUP1Q9Y679 476 aa18.34■□□□□ 0.53
IRF3-228ENST00000601291 ARHGAP32A7KAX9 2087 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 OR2A4O95047 310 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 APOA2P02652 100 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 GAPDHP04406 335 aaKnown RBP18.33■□□□□ 0.52
IRF3-228ENST00000601291 UBE2E1P51965 193 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 LGALS4P56470 323 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 CD300CQ08708 224 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 RTL8BQ17RB0 113 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 PDZD9Q8IXQ8 264 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 TCTE3Q8IZS6 198 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 MAPK1IP1LQ8NDC0 245 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 WFDC11Q8NEX6 87 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 RNASE11Q8TAA1 199 aaKnown RBP18.33■□□□□ 0.52
IRF3-228ENST00000601291 FYTTD1Q96QD9 318 aaKnown RBP18.33■□□□□ 0.52
IRF3-228ENST00000601291 OR2A7Q96R45 310 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 DPM3Q9P2X0 92 aa18.33■□□□□ 0.52
IRF3-228ENST00000601291 CSMD2Q7Z408 3487 aa18.32■□□□□ 0.52
IRF3-228ENST00000601291 HPRT1P00492 218 aa18.32■□□□□ 0.52
IRF3-228ENST00000601291 VDAC1P21796 283 aa18.32■□□□□ 0.52
IRF3-228ENST00000601291 GZMKP49863 264 aa18.32■□□□□ 0.52
IRF3-228ENST00000601291 AKR1C2P52895 323 aa18.32■□□□□ 0.52
IRF3-228ENST00000601291 BRWD1-AS2P59051 145 aa18.32■□□□□ 0.52
IRF3-228ENST00000601291 RAP2BP61225 183 aa18.32■□□□□ 0.52
IRF3-228ENST00000601291 TMEM249Q2WGJ8 235 aa18.32■□□□□ 0.52
IRF3-228ENST00000601291 S1PR2O95136 353 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 RRASP10301 218 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 EPHA1P21709 976 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 CYCSP99999 105 aaKnown RBP18.31■□□□□ 0.52
IRF3-228ENST00000601291 DIAPH2-AS1Q14236 149 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 MINOS1Q5TGZ0 78 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 DHRS7BQ6IAN0 325 aaPredicted RBP18.31■□□□□ 0.52
IRF3-228ENST00000601291 SPIN2AQ99865 258 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 SPIN2BQ9BPZ2 258 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 NABP2Q9BQ15 211 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 C7orf69Q9H7B7 122 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 PLEKHA2Q9HB19 425 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 SLC35D1Q9NTN3 355 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 MINOS1-NBL1R4GNA1 71 aa18.31■□□□□ 0.52
IRF3-228ENST00000601291 A0A1W2PRD5 423 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 A0A1W2PRF3 423 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 A0A1W2PRM7 423 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 LY6LH3BQJ8 138 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 IGKV1-39P01597 117 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 IGKV1D-39P04432 117 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 IGHV4-31P0DP07 118 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 TPTE2P1Q5T6R2 138 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 OR5AN1Q8NGI8 311 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 RRNAD1Q96FB5 475 aaKnown RBP18.3■□□□□ 0.52
IRF3-228ENST00000601291 COMMD9Q9P000 198 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 TBL2Q9Y4P3 447 aaKnown RBP18.3■□□□□ 0.52
IRF3-228ENST00000601291 TGFAP01135 160 aa18.3■□□□□ 0.52
IRF3-228ENST00000601291 HNRNPCP07910 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
IRF3-228ENST00000601291 SRSF4Q08170 494 aaKnown RBP18.3■□□□□ 0.52
IRF3-228ENST00000601291 IAH1Q2TAA2 248 aaPredicted RBP18.3■□□□□ 0.52
IRF3-228ENST00000601291 LSM10Q969L4 123 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms