RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 LSM3P62310 102 aaKnown RBP6.88□□□□□ -1.31
SSBP4-208ENST00000600628 MRPS15P82914 257 aaKnown RBP6.88□□□□□ -1.31
SSBP4-208ENST00000600628 TAGLNQ01995 201 aaKnown RBP6.88□□□□□ -1.31
SSBP4-208ENST00000600628 FOXE3Q13461 319 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 MMDQ15546 238 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 PDLIM3Q53GG5 364 aaPredicted RBP6.88□□□□□ -1.31
SSBP4-208ENST00000600628 TMEM177Q53S58 311 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 ZNF329Q86UD4 541 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 PDPNQ86YL7 162 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 GVQW1Q8N7I0 195 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 OR4X2Q8NGF9 303 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 OR8U1Q8NH10 309 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 OR2D2Q9H210 308 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 OR51J1Q9H342 316 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 DIABLOQ9NR28 239 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 ZFP57Q9NU63 452 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 LINC00527Q9UJ94 153 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 ZNF221Q9UK13 617 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 FBXO7Q9Y3I1 522 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 OR2W1Q9Y3N9 320 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 NUBP2Q9Y5Y2 271 aa6.88□□□□□ -1.31
SSBP4-208ENST00000600628 A0A1W2PRX2 142 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 SRRM4A7MD48 611 aaKnown RBP6.87□□□□□ -1.31
SSBP4-208ENST00000600628 SLC22A5O76082 557 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 TPPPO94811 219 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 EIF4EP06730 217 aaKnown RBP6.87□□□□□ -1.31
SSBP4-208ENST00000600628 ELANEP08246 267 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 PTHLHP12272 177 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 TALDO1P37837 337 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 CBX5P45973 191 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 CDX1P47902 265 aaPredicted RBP6.87□□□□□ -1.31
SSBP4-208ENST00000600628 LUMP51884 338 aaPredicted RBP6.87□□□□□ -1.31
SSBP4-208ENST00000600628 GNG2P59768 71 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 RPL23AP62750 156 aaKnown RBP6.87□□□□□ -1.31
SSBP4-208ENST00000600628 PSG5Q15238 335 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 BEAN1Q3B7T3 259 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 GPR107Q5VW38 600 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 DHRS11Q6UWP2 260 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 ZNF562Q6V9R5 426 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 FOXRED2Q8IWF2 684 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 SAMD12Q8N8I0 201 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 DRAXINQ8NBI3 349 aaPredicted RBP6.87□□□□□ -1.31
SSBP4-208ENST00000600628 BEST4Q8NFU0 473 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 GPX8Q8TED1 209 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 GIMAP1Q8WWP7 306 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 ACOT12Q8WYK0 555 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 S100A16Q96FQ6 103 aaKnown RBP6.87□□□□□ -1.31
SSBP4-208ENST00000600628 P2RX4Q99571 388 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 RASL11BQ9BPW5 248 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 BCL7BQ9BQE9 202 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 ST6GALNAC5Q9BVH7 336 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 GON7Q9BXV9 100 aa6.87□□□□□ -1.31
SSBP4-208ENST00000600628 G3V4G9 280 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 M0R1X1 148 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 SOX15O60248 233 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 BRI3O95415 125 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 NFYAP23511 347 aaPredicted RBP6.86□□□□□ -1.31
SSBP4-208ENST00000600628 LGALS7P47929 136 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 THBS3P49746 956 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 TAS2R20P59543 309 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 RPL30P62888 115 aaKnown RBP6.86□□□□□ -1.31
SSBP4-208ENST00000600628 SLC35B1P78383 322 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 CX3CL1P78423 397 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 RUNX1Q01196 453 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 FHL3Q13643 280 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 AKIRIN2Q53H80 203 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 LIN54Q6MZP7 749 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 TEX38Q6PEX7 206 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 C18orf65Q6ZTR6 163 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 LYSMD2Q8IV50 215 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 ZNF645Q8N7E2 425 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 LINC00482Q8N8I6 264 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 OR5AP2Q8NGF4 316 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 ADTRPQ96IZ2 230 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
SSBP4-208ENST00000600628 TPSG1Q9NRR2 321 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 ADAM30Q9UKF2 790 aa6.86□□□□□ -1.31
SSBP4-208ENST00000600628 RBMX2Q9Y388 322 aaKnown RBP6.86□□□□□ -1.31
SSBP4-208ENST00000600628 G3V318 75 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 ARPC1BO15143 372 aaKnown RBP6.85□□□□□ -1.31
SSBP4-208ENST00000600628 ATP6V0E1O15342 81 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 RPLP1P05386 114 aaKnown RBP6.85□□□□□ -1.31
SSBP4-208ENST00000600628 OR5H8P0DN80 308 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 RRASP10301 218 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 PF4V1P10720 104 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 ELK1P19419 428 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 RORCP51449 518 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 OXLD1Q5BKU9 147 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 DYNC2LI1Q8TCX1 351 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 FLYWCH2Q96CP2 140 aaKnown RBP6.85□□□□□ -1.31
SSBP4-208ENST00000600628 GINS4Q9BRT9 223 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 KLK15Q9H2R5 256 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 MIXL1Q9H2W2 232 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 FBXL15Q9H469 300 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 SCPEP1Q9HB40 452 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 SLC35D1Q9NTN3 355 aa6.85□□□□□ -1.31
SSBP4-208ENST00000600628 I3L521 148 aa6.84□□□□□ -1.31
SSBP4-208ENST00000600628 PPYP01298 95 aa6.84□□□□□ -1.31
SSBP4-208ENST00000600628 APOA2P02652 100 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms